Pseudoliparis swirei (Mariana hadal snailfish): 130206378
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Entry
130206378 CDS
T09868
Symbol
tnfrsf11a
Name
(RefSeq) tumor necrosis factor receptor superfamily member 11A
KO
K05147
tumor necrosis factor receptor superfamily member 11A
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
130206378 (tnfrsf11a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
pswi04050
]
130206378 (tnfrsf11a)
04090 CD molecules [BR:
pswi04090
]
130206378 (tnfrsf11a)
Cytokine receptors [BR:
pswi04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
130206378 (tnfrsf11a)
CD molecules [BR:
pswi04090
]
Proteins
130206378 (tnfrsf11a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNFR_c6
Motif
Other DBs
NCBI-GeneID:
130206378
NCBI-ProteinID:
XP_056290293
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Position
16:complement(13619435..13632732)
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AA seq
623 aa
AA seq
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MRSNTSTSWRVRGWITCVLVTFYAQNAVSKPIRCNETQYLSGGSRCCKKCQPGFRVFSDC
TESQQTICNKCNPGEYQPGWTEQMRCLQQKRCDHVKGFMERPENLVAEEPCRCLSGLQCY
PINCEYCERIPTCSAGYGLEVDPESTNGRKTCVACKKGFFSADNSAEQCKPWTNCKAGDK
SETQPGSAQADAVCGPFVSGAASSRVVVSVLSVITVLCLLILLLFCYKDKLKLLTVNLRS
CVQNLKRTRIQQETLAPLYHSGAGGGLGGGHKYIPCETTKLICQAPHSPTDEHPCTYPTS
VPDVKVSLPFTGERTEEEGTIGKTVMEDQSEGPGEPEEVSEEEEVVSVSPLLAGSCVCVI
PVHEPLEVGENEDCSQAVSPGTPGTCSCRGLEGEESGKEEKSMSVRTGANGENELCLPLS
QAQMRPVFKPHLTDRSLVKQEELYRLASTDSTSTENATTSAMTSVSPLMTSSSVGDLYLD
KPTETSNPEQGHGLSWGDSKGIKLSSGELDIECSPESLHSQLAEPTLTSGQVSGSHNTTF
ISSGQVMNFSGDVIVVYVSQTSLGSEGAGQDDAFGSPVQEEANETALFFQSGTRPQGDSI
SQSTLRDETLPVQEVMEERPLGK
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgagatcgaacacttctacaagttggagagtccgaggctggataacgtgcgtcctcgtc
accttttacgcacagaacgctgtctccaaacctatccggtgtaatgaaacacagtattta
tcgggaggctccaggtgctgcaaaaagtgtcaaccaggctttcgtgtgttttccgactgc
actgaatcccaacagacgatatgcaacaaatgtaacccgggtgaataccagcctggctgg
actgaacagatgcgctgtctccagcagaagcgctgtgaccacgttaagggttttatggag
aggcctgaaaaccttgtggcagaggagccgtgtcgctgcctttccggcctccaatgctac
cccatcaactgtgagtactgtgagaggatacccacctgcagtgctggatatggactcgag
gtggaccccgagtctactaatggaaggaagacgtgtgttgcatgtaagaaaggcttcttc
tccgctgacaacagtgctgaacaatgcaaaccatggacgaactgcaaggctggagacaag
agtgaaacacagcccggcagcgctcaggctgatgcagtgtgtggaccatttgtctctggt
gcagcttcctcccgggttgtagtttccgtgctgtcagtcatcactgttctctgcctcctc
atcctgctcctcttctgctacaaggacaagctgaaattactcactgtaaacttgcgatcc
tgtgtccagaatctgaagaggactaggatacaacaggagaccttggcccctctttaccac
agtggagcaggaggaggattaggaggtggccacaagtatatcccatgtgagacgaccaaa
ctcatctgccaagcaccccacagccccaccgatgagcacccatgcacctatccaacatcc
gttcctgatgtcaaggtctcactgcccttcacgggggaaaggacagaggaagaagggacc
atagggaagacagtgatggaggatcagagtgaagggcccggagaacccgaggaggtgtca
gaagaagaggaggttgtgagtgtgtcccctctgttggcaggttcttgtgtgtgtgtcatt
cctgtccatgagcctttggaagtgggggagaatgaggactgtagtcaggctgtgagcccc
gggactccaggaacctgctcatgcagagggctggagggagaggaaagtggcaaagaagag
aaaagtatgagtgtcaggacaggcgctaatggagaaaatgaactctgcctgccgctgtct
caagctcagatgagaccagtcttcaaacctcacctgactgacaggtcactggtaaagcag
gaggaattgtacagactggcaagcacagactccacctcgacagagaacgctacaacctct
gcgatgacctcggtcagccccttgatgacttcctcatccgttggagatctctacctagac
aagcccactgagacctcgaacccggagcaaggtcacggactctcctggggggatagcaag
ggaatcaaactctcttctggagagttagatattgagtgttcacctgagagcctccacagt
cagctggctgaaccaacgcttacctcaggccaggtgtctgggagccacaacaccaccttt
atctccagcggtcaggtgatgaacttcagcggcgacgtcatagtcgtctatgtcagccag
acgtctctcggtagcgaaggggcgggtcaggatgacgccttcgggagccctgtccaggaa
gaggccaatgagacggctctgtttttccagagcggcacgaggcctcaaggggactccatt
agtcaaagcaccttgcgagatgagacactgccagtccaggaagtgatggaggagcggccg
ctggggaagtga
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