Pseudoliparis swirei (Mariana hadal snailfish): 130207621
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Entry
130207621 CDS
T09868
Symbol
cxcl12a
Name
(RefSeq) chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1)
KO
K10031
C-X-C motif chemokine 12
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04060
Cytokine-cytokine receptor interaction
pswi04672
Intestinal immune network for IgA production
pswi04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
130207621 (cxcl12a)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
130207621 (cxcl12a)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
130207621 (cxcl12a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pswi04052
]
130207621 (cxcl12a)
00536 Glycosaminoglycan binding proteins [BR:
pswi00536
]
130207621 (cxcl12a)
Cytokines and neuropeptides [BR:
pswi04052
]
Cytokines
Chemokines
130207621 (cxcl12a)
Glycosaminoglycan binding proteins [BR:
pswi00536
]
Heparan sulfate / Heparin
Chemokines
130207621 (cxcl12a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IL8
Motif
Other DBs
NCBI-GeneID:
130207621
NCBI-ProteinID:
XP_056292260
LinkDB
All DBs
Position
17:12331226..12337350
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AA seq
98 aa
AA seq
DB search
MDMKLLAVVAALTLVMYAPPSQAKPISLVERCYCRSTVNSLPRGYIRELRFIHTPNCPFQ
VIAKLKTNKEVCVNPEIRWLQQYLKNAINKMKKSKKRH
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atggatatgaagctgttggcagtcgtggctgcgctcacgttggtgatgtatgcgcctcca
tcacaagcaaagcccataagtctggtggagagatgctactgtcgttcaacagtcaacagc
ctcccacgaggctacatccgagagctcaggttcatccacacgccaaactgcccctttcaa
gtgattgccaagctcaagacaaacaaagaggtgtgtgtgaatccagagattcggtggctg
cagcagtacctgaagaatgccatcaacaagatgaagaaatccaaaaagcgccattaa
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