KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130208120
Entry
130208120         CDS       T09868                                 
Symbol
si:ch1073-335m2.2
Name
(RefSeq) msx2-interacting protein isoform X1
  KO
K25100  Msx2-interacting protein
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04330  Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    130208120 (si:ch1073-335m2.2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pswi03036]
    130208120 (si:ch1073-335m2.2)
Chromosome and associated proteins [BR:pswi03036]
 Eukaryotic type
  Histone modification proteins
   Other histone modification proteins
    130208120 (si:ch1073-335m2.2)
SSDB
Motif
Pfam: RRM_1 SPOC RRM_5 RRM_7
Other DBs
NCBI-GeneID: 130208120
NCBI-ProteinID: XP_056293043
LinkDB
Position
18:complement(14849818..14867393)
AA seq 3295 aa
MVRETRHLWVGNLPEHVREEKIVEHFKRYGRVESVKVLRKRGSEGGVAAFVDFVDIKSAQ
KAHNAVNKMGDRDLRTDYNEPGSVPSAVRGLEDGSPSSSRDVTGFTRGTVGPVFGPPVSL
HIREGRYERRIDGSSESRERAYDHSPYGHHERSGTFDRQRHYNADYYRDRSMFAAAGPGS
SAIAGSFEASDPHFDSRVRDPFTLTNSTRRDLYRDDRGRRVDRTYHHRRSRSSHSSQSRH
PSPQRTTGQTPKTPHSPKRAPVSPGRGPRSRSHSRSSSSDSVSSTSSTGSGSDSNSSSSD
GSRAHSVQSSATHAPTQSSIGLDSDEPRRSFGIKVQNLPVRSTDTSLKDGLFHEFKKHGK
VTSVQIHGATEDRYGLVFFRQQEDQEKALTVSKGKLFFGMLIEVTAWNGPETESENEFRP
LDGRIDEFHPKATRTLFIGNLEKTTSYQQLLDIFQRFGEIVDIDIKKVNGVPQYAFVQYS
DIASVCKAIKKMDGEYLGSNRLKLGFGKSMPTTCVWLDGLATSVTEQYLTRHFCRYGHVM
KVVFDRLKGMALILYNNTDFAQAAVRETKGWKIGGNKIKVDFASQESQMAFYRSMQTSGQ
DIRDFYEIPAERREERRPPYHEFTAERAYYENIRTPGIYPEEARRDFAARSRERFPELEH
YQGEHFDPRFHEDPREYRDYRDPFEQDIRKYTYIQRERERERERFEADRSRWSPSHPRRP
VTPTVSPSPSDRAPREAERRVYSQSSERSGSASSMSPPHFDKSEKTVPEPASKSDKSSQP
DRVASAEKTKRAKRKEKGDKDKAEKIKTRKTKGQSPSNPLPETELEPGFDGGSGKGRVSD
QDAHEKPKPKGDGDSLTGNQLPTAYQDSVKSERSEMSKVENSDSDGKNRLKKHLKADIGN
DGKDSSVDSDRLAARKKRFADSAGRTIRQKRSRHEEEEVFPSSDFGASATYLKESDDDKN
KDSQRRDSRLKADKSGTPKDGQEDLRGQREKSEGSSDPLESKRHPGHTSSRRFSLEGITD
QSSIREQEHHAAFKFAAQNPDSDKSVKNKEDYVDIDLSQSYRKQMEQNRRLHQQQQQVES
DKSDKPGSPHGSETEDMEHRSLVHEVGKPPEDVTDNFPSHKLKKLDLFEPDLGIKRERVY
RSFRQKSEDPDWNIPSPGLQLFSHHGDEEFVDPSQKDLNRNEEKIHPELELLVKRTHNTQ
ANKPNTPLLSVEEEQQKRWENRVKQDVLPDLNLSRSLGKNIHNRKRLEFGIWHDLEPGEV
RSDSEEDRENKPHSPMPSTSIPFTERPRVDRFSDPKIAHLERNKFYSFALDQTITPDTKA
LLERAKSLSSSREDNWSFLDYDSHFASLRSRKDTEKVESAPRPTPSWYMKKKKIRSGSED
KLDDRKEDPKPEEQERRELFASRFLHSPVFELDSRRLQNLERKHEEPEHSLYQQQGIDGE
LDSGPVVLFHSRFLELTRLQQKNKTHQLPEAKVDIVPTDEVTVEKAPVQVPQALQSPEMM
ESIMEPEIKKEPEIKPISPAEELISELGIAPTSVTQSVVKDFPSPEETCIALNQPPDLCT
PVSIIKEEEKEEVKESEPVVPMYHPLTEAPSHTEPIQIAAPEPSYSVDGCKPPASEGKLD
ITDYVKPLCTEKPCRRDSQEFVSISEAELDPETTQPEVPEANSPIPPSLQDEEKETHTVW
SAVAEPEGERKLQISNVQMPIDDDTNDEPVSPQKEYKTKEMKSKKFKQSPAQVAPVPIIS
TSSSEKQATRKSERIDKEKLKRGSSPRAESKSTGKSPIHGSEPDMSEPGISAGRARRRNV
KSVYATPVEDDAPVRSGKETESPRSVRKRGADKDATQHNIEHDLPAPIPTTKRGRPPKNR
RLGDESSIVKVEKFKIDKDTDSNESEGGERVPRVSKGKTSPQSTKSSLNPMSTVLGFGST
RKGEKPEVADDYQEMDFTDEDSLPMQDLSSSCKEEPTIKVDQKKEEKDKQVRELGRNKDV
FHEKACEGKSNGKETDAQVLEGKPTLEKDRIVRGKTKLTRTPKSPVLKNLKIRLNVTEVK
DLLQLGDDEQEDSSKKLRPGDQSDNGSKCTNVNEEDSNNDELENATLEKKEVLESPKSLI
SQLELEQALRNIAKLTDPAFPTEPSALPVPLTEVKSDPEEEKPSNPASETELMAAIDSIT
AEHGTASLPPAAPSSADVGSEPEIPDLILPTKENESETNVPAIPEEAVFPATLKKGTKGR
PKRCKGQKQGRKDSKEGPSTSEELTTPLSDSPPSGVKTVSTTTPSATTTTPSATTTTPST
TTTTLSATTAAVITATTWKPEPEPLAVKVSDVNSESSSEDQIQHLKSVTDLSRSQIGPTP
QQMPPDCISPSLSPLANRPNIRPIQTSRIPVSPPDWRHQSKDTGLSSSLLMPLASKENQS
IPPDSENMDIDHGTSDLRQILMKHKNISCPGSSSIPSNLPTLRDQNPSESNTPSAGVANK
SPLSGSGMATHPAPPIVRAPASLPSSETKSVISVIASTATSVISRVCNPPEPEDKVNINL
GNPCVDSPLPKPAYRPSKDDTGSYHGPSVGDGGGSAAHFIVESPTLGPGSCPGLRVNTSE
GVVVLSHSGQKTEGPQRISAKISQIPQATAGDMESQQLVSMPQIKQEMYGHSHVGLQKGP
SLQADHGHPGKMQSTLSSIKQESTGLEKMESNYQSTPQGVVKRLTQGNQQVMSYHPEYMP
IKHQKKMDSVDPHSTDGAKPTWTSAISPAISPHLPSPPGNHVGFAPAPGDRATSHISGAK
QEPRSPRKSGHPHTQFTKVSSPGGSSSPKGTGMLSTGLPAMQQFITGVHHAEQSVIMPPL
SGPGGLGRMSPHRVNQSIPVGHLVQSDGRVNTPPLSVMSYGMHSEPLASQWSGPIQSRPT
SPQAVGRDKVLKVNPGSLRGHDGEQDEARRFHQASGRQSAPQLKPETIQSDPRGSLRSNV
QLETYMTQRDMRVLLQQQGESLATDTHSGIIQETLPPSSAPSSLPLSLSPRAHVLPKGVS
EKDITKPLEAKRPHSPLPKDGMMGIRQSGQAMASPQRVQLMPPGPSGSFPEYTGMYSNPR
GIHSQIPESSPVGPNQPPPTVTPSMGADPQTKPDGKPVNMVQLLTKYPIVWQGLLALKND
TAAVQLHFVCGNKALAHRSLPLQEGGALLRIVQRMRLEASQLESVARRMTVRALFLSPLS
LFSLKKKWNLTTIPCFCLQGDSDFCLLLALPCGRDQDDVLNQTQALKAAFINYLQAKLAA
GIINIPNPGSNQPAYVLQIFPPCEFSESHLSQLAPDLLNRISSISPHLMIVITSV
NT seq 9888 nt   +upstreamnt  +downstreamnt
atggttcgggaaaccagacacctttgggtgggaaatttacccgaacatgtccgagaggag
aaaatcgtggagcattttaaacggtatgggcgtgtggaaagtgtcaaagtcctgcgcaag
cgggggtcagagggtggcgttgcagcctttgtggattttgtggatatcaaaagtgcgcag
aaggctcacaatgctgtcaacaagatgggagacagggaccttcggactgactacaatgaa
cctgggtcagtccctagtgctgttcggggccttgaagacggctcaccctcgagcagtcga
gacgttacaggattcactaggggaacagttggtccagtgtttggcccacctgtttccctt
cacatcagagagggacgttatgaacggagaatagatggtagctcagaaagccgtgaacgt
gcatatgatcacagcccatatggacaccatgagcgcagtggcactttcgacagacagcgt
cactacaatgctgattattaccgtgatcgttccatgtttgctgctgctggcccagggagc
agtgctatcgcggggagctttgaggcatcagacccacattttgattctagagttcgagac
ccctttactctgactaattctacaagacgtgacctatacagagacgacagaggacgacgg
gttgatagaacctaccatcaccgccggagtcgatcatctcattcctcgcagtcgaggcac
ccttccccacaacggaccacaggacaaactcccaaaacacctcattcccctaaaagagct
ccggtgtcccctggaagaggtccacgatctcgatcccacagcagatcctcaagctctgat
tctgtcagcagcaccagcagcacgggcagcggcagtgattcaaacagcagctcaagtgat
ggatctcgggcacactctgttcagtcgtcagcgacacacgccccgactcagtcttctatt
ggacttgactcggatgagccacgcagaagctttggaattaaagtgcaaaacctaccagta
cgctccacagacacaagcttaaaagatggacttttccatgaattcaagaaacatgggaaa
gtgacctcggtacagatccatggagctacagaagaccgctatggtttggtgttctttagg
caacaagaagatcaggagaaagccctcaccgtctccaaaggaaagctgttctttggcatg
cttattgaagtcacggcctggaatggcccagaaacagagagtgaaaatgaattcaggccc
ttggatgggcggatagatgagttccacccaaaggccacgaggacactgtttataggaaac
cttgagaagaccaccagttatcaacaactccttgatatttttcaacgctttggagaaatt
gtggacattgacatcaagaaagtaaatggagttccccagtatgcctttgtgcagtattct
gatattgccagtgtctgcaaggccattaagaagatggatggagagtatctgggaagcaac
agactgaagcttgggtttggaaagagtatgcccactacgtgtgtttggctcgatggttta
gcaaccagtgttacagagcaatacctcacacggcatttctgtcgttatggacatgtaatg
aaggttgtgtttgatagattgaaagggatggccctcatcttgtacaacaacacagatttt
gctcaggcagctgtaagggagaccaaaggttggaagattggtggcaataaaataaaggtg
gactttgcaagtcaagagagtcagatggcattctaccgatctatgcagacatccggacaa
gacataagagacttctatgaaattcctgctgaacgacgcgaggaacgcagacctccatac
catgaatttactgcagaaagggcttactatgagaatatacgaacccctggcatctatcca
gaggaagctcgaagagactttgctgctcgcagcagagaacgttttcctgaactggaacac
tatcagggggaacactttgacccacgctttcatgaagacccaagagaatacagggattac
agagacccctttgagcaagacatccgaaaatacacatatattcaaagagagcgagaaaga
gaacgagaacgttttgaggctgaccgcagcaggtggagcccttcccatccaaggcgacct
gttactcctacggtatcgccatcgccatctgaccgtgctcccagagaagcagaacggcgg
gtatacagccagtcctctgagagaagtggtagtgcgagttcaatgtcaccaccacacttt
gataaatctgaaaagaccgtgcctgaacctgcctcgaagagtgataagagcagccaacca
gatcgtgtggcaagcgctgagaaaaccaaacgtgcaaaacgaaaggagaaaggtgacaaa
gacaaagcggagaagattaaaacaaggaaaacaaaggggcaatccccatccaacccatta
cctgaaacggagcttgagccgggttttgatggagggtctggaaaaggaagggtatcagac
caggatgctcacgagaagccgaaacctaaaggggatggtgactctcttactggaaaccag
ttgccaactgcttatcaagactctgtaaaaagtgaaagatctgaaatgagtaaagttgag
aattcagactctgatggaaaaaacagactcaagaaacatcttaaggccgatattggaaat
gatgggaaagattcatcagtggactctgatcgccttgctgcaaggaaaaagcgctttgct
gattcagctggccggactattcgtcagaaaagaagcaggcatgaggaggaggaagttttt
ccctcctctgactttggtgctagtgcaacatatttgaaggaatcggacgatgacaaaaac
aaagattcacaacgcagagattcaagactcaaagctgataaaagtggcactcctaaggat
ggtcaagaagacttaagaggacaaagagagaaatcagagggctcttcggacccactggag
tcaaaacgacatccagggcacacttcatccagaaggttttctcttgagggaattacagac
caaagcagtataagggagcaagaacaccatgctgctttcaaatttgctgctcagaatcca
gactctgataaaagtgttaaaaacaaggaagactatgttgatattgacctctctcagagt
taccgcaagcaaatggagcaaaatagacggttgcaccagcagcaacaacaggttgagtct
gacaaatctgacaaaccaggaagtcctcatggaagtgaaacagaggacatggaacatcgc
agtcttgtgcatgaagttggtaaaccaccagaggatgtcacagataatttcccgtctcac
aaactaaagaaactagacctatttgaacctgatttaggaattaagagggagcgtgtctac
aggagttttagacaaaaaagtgaagatcctgactggaacatcccctctccaggacttcag
ctcttctctcaccatggagatgaggagtttgtggacccttctcagaaagacttaaataga
aatgaggaaaagattcacccagaactggagctattagtcaaaaggacacataacacacag
gcaaacaagccaaacactcctttacttagtgtggaagaagagcaacaaaagagatgggag
aacagagttaaacaagatgtgttacctgacctgaacctttcaagaagtctaggtaagaac
attcacaatcgcaagcgtttggaatttggtatttggcatgacttggagcctggagaagta
agatccgactccgaagaggaccgagagaacaaaccccactctcccatgccgtccacatct
ataccttttactgagaggccaagggttgacaggttttcagaccctaaaatagcacatctt
gaaaggaacaagttctactcctttgcacttgatcaaactatcacacctgatacaaaggct
ctgcttgaacgagcaaaatctctttcctcttcaagagaagataactggtcgtttttggat
tatgattctcactttgcaagtttacgcagcagaaaggatactgagaaggtagaatcagca
ccacgacctacaccttcctggtacatgaaaaagaaaaagattcgaagtgggtctgaagac
aaacttgatgacaggaaggaggaccctaagccagaggaacaggaacgccgggaacttttt
gcctcacgcttccttcacagccccgtctttgagctggactctaggcgacttcaaaacttg
gaacgcaaacatgaagaacctgaacattctctctaccaacagcaaggaatagatggtgaa
cttgactctgggccagttgtccttttccatagtcgttttttggaactaacacgactgcaa
cagaagaataaaactcatcagctgccagaggcaaaagtagacatagttcccacagatgag
gttacagtggaaaaggcaccagttcaagtgccacaggctttgcagtctcctgaaatgatg
gaatcaatcatggagccagaaattaagaaggagccagaaattaagcccatcagtcctgct
gaagagctgatctctgaactcggaatcgcaccaacttctgtcacccaatctgtggtcaaa
gactttccatcaccagaggagacatgtattgctctaaaccagccccctgatctatgtacc
ccagtgtctattataaaggaagaggaaaaagaagaggtgaaagaaagtgaaccggtcgtt
cccatgtaccacccattaactgaggcgccatctcatactgaacctatacaaatagcagca
cctgaacccagttattcagttgatggatgtaaaccacctgcatctgaagggaaattggat
attactgattatgtaaaacctctgtgtactgaaaaaccatgccgtcgtgactctcaagag
tttgttagcatttcggaagcagaactggatcctgagacgacacaaccagaagtgcctgaa
gccaatagtcccataccacctagtcttcaagatgaagagaaagaaactcacacggtttgg
tcagcagtagcagagcctgagggagagaggaaacttcaaattagtaacgtgcagatgccc
attgacgatgacacaaatgatgagccagtctctcctcagaaagagtataaaacaaaagaa
atgaaaagtaaaaagttcaaacaatccccagctcaagttgctcctgttcccatcatatct
acctctagttctgagaaacaagcaacacgcaagagtgagcgcattgacaaagagaagctg
aaacgtggatcgtccccaagagctgaatcaaagtccacaggcaaatctcctattcatgga
tcagaacctgatatgtctgagccaggcatatcagcaggcagagcaaggcgaaggaatgtt
aaatcggtgtatgccactccagttgaagatgatgcgccggttcgttccggaaaggaaact
gagtccccgcgctctgtgcgaaagcgaggtgcagacaaagatgccacacaacacaatatc
gaacacgatctacctgccccaattcctacaactaaaaggggccgtccacccaagaatcgc
agactaggtgacgagagttcaatagtaaaagtagaaaaatttaaaatagacaaagacaca
gattctaacgaatcagaaggtggggaacgagttcctagagtgtcaaaaggaaagacatcc
cctcagagcacaaagagttcactgaatccaatgtcgacagtcctaggatttggatcaaca
aggaagggggaaaaaccagaggtggctgatgattatcaggaaatggatttcacagatgaa
gattccttgcctatgcaagatttatcaagttcatgtaaagaagaaccaaccataaaagtt
gaccaaaagaaagaggagaaagacaaacaagtaagagaattgggcagaaataaagacgtt
tttcatgaaaaggcttgtgagggtaaatcaaatggaaaagagacagatgcacaagtcttg
gaagggaaacccaccttggaaaaagacaggattgttcgaggaaaaaccaagttgactagg
actcccaagtctcctgttcttaagaacctcaaaatcagactaaatgtgacagaggtgaaa
gatcttcttcaattaggggatgatgaacaagaagattcgtcaaagaaattaagacctggt
gaccagagtgataatggttcaaagtgtaccaatgtcaacgaagaagattccaacaatgac
gaactggaaaatgccactttggaaaaaaaagaggttcttgaatcaccaaaaagtttaatt
tcacagctggaattggagcaggctctgaggaacattgctaaacttacagatccagctttt
ccaacagaaccatcggcgctgcccgtcccgcttacagaagtgaaaagtgacccagaggaa
gaaaaaccttccaatcctgcgagcgagacagaactcatggctgctattgactccataact
gctgaacatggaactgcgtcattacctcctgcagctccatcaagtgccgatgtaggttca
gaacctgagataccagacttgattttgcctaccaaagaaaatgaatctgaaacgaatgta
cctgctataccggaggaggctgtcttccctgccacattgaaaaagggcaccaagggaaga
cccaaacgttgtaaaggccaaaagcaaggaagaaaagattcaaaggagggaccttcaaca
agtgaagaattgaccactcctttatcagatagcccaccttccggtgtaaagacggtttct
acaacgactccatcggcaacaacgacgactccatcggcaacaacgacgactccatcaacc
acaacaacgactctatcagcaacaactgctgcagttattactgcaactacatggaagcca
gaacctgagcctttagctgtcaaagtttcagatgtgaactcggagtcatcttctgaagat
cagattcaacatcttaaatctgttacggatctgtctaggagtcaaattggtccaacgcct
caacagatgcctcctgactgcatctccccatcactgtctcccttagccaacaggccaaat
atcagacccattcaaacaagtagaattcctgtttctccaccagattggcgccatcaatct
aaagatacgggactctcctcttcacttctcatgccgttggcatccaaggaaaaccagtct
atacccccagactctgaaaacatggatattgatcatggcacaagtgacttgaggcagatt
cttatgaaacataaaaatatttcatgtccaggcagtagttctattccaagtaatctaccc
actctgcgagatcagaacccctctgaaagtaatactccatcagctggtgtggcaaataag
tcgccactatccggtagtggaatggcaactcatccagctccacccattgttcgagctcca
gcctcactaccatcttctgagacaaagtctgtgatctctgttattgcatccactgcaacc
tctgttatcagtcgtgtttgcaaccctcctgagcctgaggacaaagtaaacataaacctt
ggaaatccctgtgtggacagccctctacccaaaccagcttataggccgagcaaagatgat
actggatcataccatggcccatctgttggcgatggaggtggaagtgctgcacactttatt
gtcgaaagccctactcttggtccagggtcttgtccagggttaagagtaaatacgtctgaa
ggagtggtagtattgagccactcaggccagaaaacagagggaccacagaggattagtgca
aaaataagtcagatcccacaagcaacagcaggtgacatggaatctcagcagctggtgtcc
atgccccagataaaacaggaaatgtatggccattctcatgtaggacttcagaaggggcct
tcattgcaggcagatcatgggcatcctggtaagatgcagtccactttgtcttctattaaa
caggaaagcactggtttggaaaagatggaatctaattaccaatctacacctcaaggtgta
gtgaagcgtctcacacagggaaaccagcaagtaatgagttaccatccagagtatatgcca
ataaaacatcaaaagaaaatggacagtgttgatcctcacagtacagatggagctaaaccg
acttggacctctgccataagtcccgcaatcagcccccatttgccctctccacctggcaac
catgtaggttttgctccagcacccggtgacagagcaacctctcacatcagtggggccaaa
caggagccacgatcccctcgtaagtcaggccatccacacacacaatttactaaagtgtcc
tcccccggaggctcctcgtcaccaaagggcacagggatgttatcaacgggccttcctgcc
atgcagcagtttattactggtgtacatcatgcagagcagtcggttatcatgccacctctc
agtgggcctggaggcttgggacggatgtctcctcaccgtgtcaaccagtcaattccagtg
gggcatcttgtccaatcagatggacgggtcaatactccacctctctctgtgatgagctat
gggatgcatagtgagcctctcgcctctcagtggtctggtcccatccagtcccggcctacc
tcgccccaggctgttggcagagataaagttctcaaggtgaaccccggttctttaaggggt
catgacggggaacaggatgaagccagacgcttccaccaggcatcaggaagacaatctgct
ccacagttaaaacccgagactattcagtcagatcctcgcgggtctttgcgaagtaatgtg
cagttagaaacatacatgacacaaagagatatgcgcgtcctcctgcagcaacaaggagag
tctttggccactgacacgcattctggaatcattcaagagacccttcccccctcttctgca
ccttccagcctgcccttatctttgtctccaagagcacatgtcttgcctaaaggtgtgtct
gagaaggatataacgaagccattggaggcaaagaggccacactctcctcttcctaaagat
ggaatgatgggcatcagacaaagtgggcaagcaatggcatctccccagagagttcaactc
atgcctccaggacctagtggctcattcccagagtacacagggatgtactcgaacccgaga
ggcatccattctcaaataccagagtcgtctcctgttgggcccaaccagccgccaccgacc
gtcacacccagcatgggtgcagacccccagaccaaaccagatggcaagcccgttaatatg
gtgcagttactgacgaaatacccaatagtgtggcaaggcctgttggcactgaagaatgac
acagctgcagtccagttgcattttgtctgcggtaacaaagcgctggctcatcggtccctg
ccgcttcaagaaggaggcgcattgcttcggattgtccagcgaatgaggctggaggcttca
caactagagagcgtagctcgaagaatgacggtgcgtgctctttttctgtctccattgagt
ctcttttctttaaaaaaaaaatggaatctaacaacaattccatgtttctgcctacagggg
gacagtgacttctgtcttctccttgcgttgccatgtggacgagatcaagacgacgtccta
aaccaaactcaggctctcaaggccgcgttcatcaactacttgcaggcaaagttggctgct
ggtatcattaatatcccaaacccaggttctaatcagcctgcctatgtgctccagattttc
ccaccatgcgaattttcagagagccacttatctcagctcgcccccgaccttctcaacagg
atctccagcatctcgccacaccttatgattgtcatcacctctgtgtaa

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