Pseudoliparis swirei (Mariana hadal snailfish): 130208570
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Entry
130208570 CDS
T09868
Symbol
phc2b
Name
(RefSeq) polyhomeotic-like protein 2b isoform X1
KO
K11457
polyhomeotic-like protein 2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
130208570 (phc2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pswi03036
]
130208570 (phc2b)
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
130208570 (phc2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHC2_SAM_assoc
SAM_1
zf-FCS_1
SAM_2
zf-CGNR
Motif
Other DBs
NCBI-GeneID:
130208570
NCBI-ProteinID:
XP_056293748
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All DBs
Position
18:6235103..6266221
Genome browser
AA seq
942 aa
AA seq
DB search
MGHHTPASRRGGRRRHRRAIQKSRGSKVRRAEGTMESEPGASAANSTGAASASSSTTAAS
SSSASNNTNTTTATTTAATTSGSSGGGGNTPSSASGSTTAGRQTVPQISVYSGIPDRQTV
QVFQQALHRPNTAAQYLQQMYAAQQQHLMLQSAALQQQHNLSNAQLQSLAAAQQASIAAG
RQSSSQNGTSSQQAGSTPATINLTTSPAATQLISRAQSIGSTPTGISHQAVLLGSPSSPT
FTASQAQMYLRAQMAQQNNLVQVARSLGRAVPLSPQLIFTPTATVTAVQSESSTQTSSQN
QVQNLAIRGQQGATTSSSQTQTLQALSLKQSPVPIQPASLVKSPSQVTQASAGGKAGSSD
GPFEAGKKGNGAAVPEVRAINMSRSVTAVSAQPLIAPAYTQVQPHSLVQQQQFVVHQSPA
SPRAAGQLLQTASIQPLQHPVPVLTKPAPHQPSMPSQQATIFHSTVSPHGVHSCLNHAKA
QPVQLTAINLQIQPTAARGLVQDTKDKPTSLVVRETCPATQQQQQQQQQQQQQQQLQQQQ
LQQLQQQQQQQLQQQLQLQQQQQQQQQPAPSPPQPSKPVEQPKVAAAAPAAQPQAGTGAS
TKRASAAPGPPAPAMTSGTESEAPTVTGSAPHNGESKPPQAVVKPQVLTHVIEGFVIQEG
AEPFPVCVERLPILMDSPRKLDHQLSSDPDRTPVSNAANSDSEPEDMNLPEKEQEPKLTC
EYCGWVDFAFTFKGSKRFCSMVCAKRYNVGCTKRIGLFRPERNKPTSRWRRRSPGRSSVE
AKKQKRTPSPRQAQGGSVSSPHPSQPSQEESSPCSDMSSYEEPPSSPLSAASSGAPAPPP
AQVPAHRHPSSRASERDGGVRDAPSPCRRFVPNDPAKWNVGEVYDFIRSLPGCQEIADEF
RSQEIDGQALLLLKEDHLMNTMNIKLGPALKIFARINMLKDS
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggggcatcacacccctgcatcgcgtcgggggggccggaggaggcacaggagagccatt
cagaagagtcgggggtcaaaggtgagaagagcagagggcaccatggagagtgagccgggg
gcctccgcggccaacagcaccggcgccgcctccgcctcctccagcaccacagctgccagc
agtagtagtgcctccaacaacaccaacaccaccaccgccactacgaccgccgccaccacg
tccggtagtagcggtggcggcggtaacactcccagtagtgccagtggtagcaccacagca
ggaagacagacggtgcctcagatatcggtgtacagcgggatacccgatcgacaaacagtg
caggtgttccagcaggcgttgcacagacccaacacggcggcgcagtacctgcagcagatg
tacgccgcgcagcagcagcatctgatgctgcagtccgccgccctccagcagcagcacaac
ctcagcaacgctcagctgcagagcctggccgccgcgcagcaggcgagtatcgcagctggc
cggcaaagctcttcacagaacggcacttcctcccagcaagcgggatcgactccggctacg
atcaacctgacgacgtccccggcagccacacagctgatcagccgggcccagagcatcggt
tcgacccccaccggcatttcccatcaggcagttctgctgggcagcccatccagccccacg
ttcacagccagccaggcacagatgtacctgcgtgcacagatggcgcaacagaacaacctg
gtgcaggtggcccggagcctgggccgggcggttcctctgtcgccgcagctcatcttcact
ccgacggccacggtgacggccgtccagtcagagagctccacgcagacctcctcccagaat
caggtccagaacctggccatccgtggccagcagggggcgaccacgtcctcctctcagact
cagaccctgcaggctctcagtctgaagcagagcccggtgcccatccagcccgcctcactg
gtcaagagtcccagccaggtgacgcaggcctccgcgggggggaaggccggctcctccgac
ggcccatttgaagcggggaagaaggggaacggagcagcggtcccagaggtccgagctata
aacatgagccgcagcgtcaccgccgtcagtgctcagcctctgattgctccagcatacacg
caggtccagccccactccctggtgcagcagcagcagttcgtggtccaccagagtccggcc
tccccgagggccgcgggccagctgctgcagaccgcctccattcaaccgttgcagcacccg
gtgcccgttctgaccaaaccggcgccgcaccagccctccatgcccagccagcaggccacc
atcttccactccaccgtcagcccccacggcgtccactcctgcctcaaccacgccaaagct
cagcccgtccagctcaccgccatcaacctgcaaatacaaccgacggccgcccgaggactg
gtccaggacactaaagataagccaacgtcgctggtggtcagggagacgtgtccagccacg
caacaacaacaacaacagcaacaacaacaacagcagcagcaacagctacaacagcagcag
ttacagcagctccagcagcaacaacaacaacagcttcagcaacagctacaactgcagcag
caacaacaacaacaacaacaaccggcgccttcgccaccgcaaccctccaagcccgtggag
cagcccaaggtcgccgcagccgctccggccgcccagccacaagcgggcaccggggcctcc
accaagagggcgagcgccgcgccggggcccccggctccggccatgacctcggggaccgag
agcgaggcgcccaccgtgaccggcagcgcgccgcacaacggggagagcaagccgccgcag
gccgtcgtcaagccccaggtcctcacgcacgtcatcgagggcttcgtcatccaggaggga
gccgagccgttccccgtgtgtgtggagcgtctgccgattcttatggacagcccgaggaag
ctggatcaccagctctcctcggaccccgacagaacccccgtcagcaacgcagccaacagc
gactctgagcccgaggacatgaacctgccggaaaaagagcaagagcccaagctgacgtgt
gaatactgcggctgggtggacttcgccttcacgttcaaaggctccaaaaggttctgctcc
atggtgtgtgcgaagaggtacaacgtcggctgcacgaagcggatcggcctcttccgcccg
gagaggaataaaccgacgagccgctggcggagaagatctccgggccgctccagcgtagag
gcgaagaagcagaagcggaccccctcgccgcggcaggcccagggcggctccgtgtcctcg
ccgcacccctcgcagcccagccaggaggagtccagcccgtgctcggacatgtccagctac
gaggagccgccgtcgtcgcccctgtcggcggccagctcgggggccccggccccgcccccg
gctcaggtccccgcccaccggcatccgagcagcagggcctccgagcgggacggcggcgtc
cgagacgcgccgtcgccctgccgccgcttcgtccccaacgaccccgccaagtggaacgtg
ggagaggtttacgacttcatccgctcgctgccaggttgtcaggagatcgcggacgagttc
cgctcccaggagatcgacgggcaggcgctgctcctgctgaaggaggaccacctcatgaac
accatgaacattaaactgggcccggcgctcaagatcttcgctcgcatcaacatgctcaaa
gactcgtag
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