KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130208628
Entry
130208628         CDS       T09868                                 
Symbol
rad18
Name
(RefSeq) E3 ubiquitin-protein ligase RAD18 isoform X1
  KO
K10627  E3 ubiquitin-protein ligase RAD18 [EC:2.3.2.27]
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pswi04121]
    130208628 (rad18)
   03400 DNA repair and recombination proteins [BR:pswi03400]
    130208628 (rad18)
Enzymes [BR:pswi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     130208628 (rad18)
Ubiquitin system [BR:pswi04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    130208628 (rad18)
DNA repair and recombination proteins [BR:pswi03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    130208628 (rad18)
SSDB
Motif
Pfam: zf-C3HC4_2 zf-RING_6 zf-C3HC4 SAP zf-RING_2 zf-RING_UBOX zf-C3HC4_3 zf-RING_5 zf-WRNIP1_ubi FeoB_Cyto RING_XB3-XBAT31 zf-C3HC4_4 zf-rbx1 RING_ZNF598 DUF3150
Other DBs
NCBI-GeneID: 130208628
NCBI-ProteinID: XP_056293850
LinkDB
Position
18:15587339..15616798
AA seq 498 aa
MAPQIEADLPPVFACLKNVDALLRCPICFDFLNISMMTKCSHNFCSLCIRKFLCYKLQCP
VCNTKVSEQDLRTNRLLDDLVVHFQVARQKLMKANFESPPISPRIPASAVKCKTPRERGQ
NCNGSVLSHFFQKKPKTSPTKETQRDGSVTQSAERRKIETAHTHNANDADLHSATDQLPL
VVKKEPMHGQMTSIQGLMSVKQEAGVSHSMSTEDEMAHSLLPSKDEKPLIKVECPVCSVG
VPHQFINKHLDTCLTRGEKKESLRSSPGHARRPMTKLVYNLLSMQELKRRLKECHLSMQG
PRDQLIRRHQDFVHIYNAQCDSLNPKSAADIAKDLEANEKIRNQLQGKAKPVMVFSKNQS
EEEIEEIHSNYRKKHSSDFSRLIANVRCTLIKQDVTLEGEDAQKTHSADLVAGSKSCSVM
KVEDITSDAEPSARRIEFSSSPTYSDVSISSSISDIFGPEPATHPKEPEKTSVQKRTSST
RGDKAASSLVGGKRRRKT
NT seq 1497 nt   +upstreamnt  +downstreamnt
atggctccacagattgaagcggatttaccacctgtctttgcatgtctaaaaaatgttgat
gccctgctccgatgtcccatttgcttcgactttctcaatatttcaatgatgactaaatgc
tctcacaacttttgctccttatgtatcagaaaatttctttgctataagttgcagtgtcca
gtttgcaatacaaaagtatctgaacaagatttaagaaccaaccgtttattggatgacttg
gttgtacactttcaagttgcaaggcaaaagttgatgaaagcaaattttgaatctcctcca
atatcgccaaggatcccagcttcagctgtcaaatgcaaaactcctagagagagaggccag
aactgtaatggctctgttttgagtcactttttccaaaagaagcctaaaacatctcccact
aaggaaacccagcgagatggatctgttactcagagtgctgagcggaggaaaatagagact
gcacacacccacaatgcaaatgatgctgacctacattcagcaaccgatcaacttccattg
gtcgtgaagaaagagccgatgcatggtcagatgacatctatccagggtttgatgtcagtc
aaacaggaagccggagtctcacacagtatgagcaccgaggatgagatggcacattcctta
ttaccatccaaagacgaaaagcctctaatcaaagtagagtgcccggtgtgttccgtcggt
gtaccacaccagtttatcaacaagcatctggacacgtgtctcaccagaggagagaagaag
gaaagcttgaggagctctcctggccatgcgaggcgtccaatgacgaagcttgtgtataac
ctgctttcaatgcaggagctgaagaggaggctgaaagaatgccatctctcaatgcagggt
cctcgagaccagctgatcagaagacaccaggattttgtccacatatacaatgcccagtgt
gattccctaaaccccaaatcagctgcagacattgccaaagacttggaggccaatgagaag
ataaggaatcaactgcagggcaaagccaaacccgtcatggttttctcaaagaatcagtcc
gaggaggagattgaggagattcattcaaattacaggaagaagcacagcagtgacttttcc
cggctgattgccaacgtgcggtgtactcttatcaaacaggatgtcactttggaaggagaa
gatgcacagaagacacactctgcagatctagttgcaggatcaaaaagctgctcagtgatg
aaggtagaagacataacatctgatgctgagccatctgcaagaaggattgaattttcatcc
agccccacgtatagtgatgtgtccatcagcagttctatttcagacatctttggtccagag
cctgccacacaccccaaagagccagagaagacctcagtccaaaagcgaacatccagcacg
agaggagacaaagcggcttcatcactcgtcggtggaaaacgacggcgcaagacgtaa

DBGET integrated database retrieval system