Pseudoliparis swirei (Mariana hadal snailfish): 130208778
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Entry
130208778 CDS
T09868
Symbol
iars1
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
130208778 (iars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pswi01007
]
130208778 (iars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pswi03016
]
130208778 (iars1)
Enzymes [BR:
pswi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
130208778 (iars1)
Amino acid related enzymes [BR:
pswi01007
]
Aminoacyl-tRNA synthetase
Class I (U)
130208778 (iars1)
Transfer RNA biogenesis [BR:
pswi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
130208778 (iars1)
Prokaryotic type
Other AARSs
130208778 (iars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Ubiquitin_IARS1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Plectin_PPL
PriX
Motif
Other DBs
NCBI-GeneID:
130208778
NCBI-ProteinID:
XP_056294076
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All DBs
Position
18:11108292..11156068
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AA seq
1268 aa
AA seq
DB search
MVERVPESINFPSEEENVLQFWQTKDCFQECLKQSKNRPKFTFYDGPPFATGLPHYGHIL
AGTIKDIVTRFAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGIKGPADVAKMGIAEYNKQC
RNIVMRYSSEWKILVNRMGRWIDFENDYKTLYPWFMESVWWVFKQLYDKGMVYRGVKVMP
FSTACNTPLSNFESNQNYKDVQDPSVIVNFPLVGSEDVALIAWTTTPWTLPSNLALCVNP
DFLYVKVKDNATEKTYIMMEARLGALFRSESEYTLLDKFPGKTLKGKKYKPLFQYFAKCE
ETGAFQVVLDNYVKEEEGTGVVHQAPYFGADDYRVCTEYKIIQRDQAPICPVDASGCFTS
EVTDFAGQYVKEADKNIIKWLKEKGRLVNSSSVKHSYPFCWRSDTPLIYKAVPSWFVRVE
HMVDKLLENNSKCYWVPEFVREKRFGNWLRDARDWAISRSRYWGTPIPLWVSDDFEEVVC
VGSIAELEELTGVKVTDLHRESIDSLTIPSRCGKGVLRRITEVFDCWFESGSMPYAQAHY
PFENKKEFEDSFPADFIAEGIDQTRGWFYTLLVLSTALFGRPPFKNVIVNGLVLASDGQK
MSKRKKNYPDPGLIVQQYGADALRMYLINSPVVRAENLRFKEDGVRDVLKDVLLPWYNAY
RFLVQNVQRLQKEDDIQFIYNENTAKQSDNIMDKWIQSFTQSLIQFVKAEMDVYHLYTVV
PRLVKFVDMLTNWYVRTNRRRLKGESGTEDCLCALETLFSVLFSMCKLMAPFTPFITEMM
YQNLRHLIDPASVEEKDSSSIHYLMLPQVRESVIDKRIESAVCQMQSVIELGRVIRDRKT
LPVKYPLKEVVVIHQDQEALKDIQSLQKYILEELNVRQLTLSTDKDKYGIRLRAEPDHMV
LGKRLKGAFKAITASIKELTSEQLEAFRKKGSIEVDGHELHEEDLRLIYTFDQSSGSAAQ
YEAHSDSQVLVLLDVSPDQSMMDEGVAREVINRIQKLRKKGHLVPSDEITVYYRCQPEGQ
YLGSVIQAHTDFILATTKAPLLPFPIPKTASVIIEEKTQLKGSDLELTIVKGSSAPQALL
NGPACTYVNIRVTVNNKEQEGVVLLENPKGDNRLNLDTLKKVCSSIFRTKDSQLRVFNGG
TELTSKMDLQALSGSTVSVTSGSSSPGLAQTTDGLLCPYVNLVLCNAQPAECQTGEVGTL
LLVNPVGQNGLHYSGLLSEAAKVFGLRSRRVKLYLDQDLSQELPADSSVKSLDTKTLFVR
VLPTTAEA
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atggtggaacgagtccccgagtccatcaacttcccttcagaggaggagaatgtcctgcag
ttctggcaaacaaaggactgcttccaggaatgccttaaacagtccaagaacaggcccaag
ttcaccttctacgatggccctccttttgccacgggtctcccccattatgggcacatcctg
gccggcaccataaaggacattgttactcgctttgctcaccagagtggcttccacgtggac
cggcgctttggctgggactgtcacggcctgcccgtggaatatgagattgataaaactttg
gggatcaaagggcctgcagatgtggccaagatgggcatcgctgagtacaacaagcagtgc
agaaacattgtcatgagatactccagcgagtggaagattttagtgaatcgaatgggaagg
tggattgacttcgagaacgactacaagactctctacccgtggttcatggagagtgtctgg
tgggtgttcaaacagctgtacgacaagggtatggtttaccgaggagtcaaagtcatgcct
ttctccaccgcctgcaacacccccttgtccaactttgagtccaaccagaactacaaggac
gttcaggacccatcagtgatcgtcaacttcccattggttgggagtgaagatgtggcgtta
atcgcctggacgacgacaccttggacactgccaagcaacctggccctctgtgttaaccca
gatttcttatacgtcaaggtcaaagataacgccacagagaagacctacatcatgatggag
gccagactgggagctctgtttaggtcggagagcgagtacactctcctcgacaaatttccc
ggcaagactctgaaggggaaaaaatacaagcctctcttccagtactttgccaagtgtgag
gagacgggcgcgttccaggtggtgttggataactacgtcaaggaggaagagggcacagga
gtggtccaccaggcaccttactttggagctgatgattacagggtgtgcaccgaatacaag
atcatccagagggaccaggctccgatctgccctgtggacgcctcgggctgcttcacttca
gaggtcactgactttgcgggacagtatgtcaaagaagccgacaaaaatatcatcaagtgg
ctgaaggagaagggtcgcctcgtcaattccagcagtgtcaaacatagttaccccttctgc
tggaggtctgacactcctctgatctacaaagccgtccccagctggtttgttcgagtggag
cacatggtggacaaactactggagaacaacagcaaatgttactgggttccagagtttgtg
cgggagaagcgtttcgggaactggctgagagatgcacgagactgggcgatttccaggagc
cgttactggggcactccgatccctctctgggtcagcgacgactttgaggaggtggtgtgt
gtcgggtccatagctgaactggaggaactgaccggtgtcaaagttactgatctgcatcgg
gagagcattgacagcctgacaatcccgtcgcggtgtgggaagggcgtgctgcggaggatc
acagaggtgttcgactgctggtttgagagcggcagcatgccttacgcccaggcccactac
ccctttgaaaacaagaaggagtttgaggactctttcccagccgacttcatcgccgaaggc
attgaccagacgaggggatggttctacaccttgctggtgctctccacggcgctgtttggc
agaccgcccttcaagaacgtcattgttaacggattggtactcgctagcgatggacagaag
atgagcaagcgcaagaagaactacccagatccaggactgatcgtgcagcaatatggagct
gatgccctcagaatgtacctcatcaactccccagtcgtgagagcagagaacctgcgtttc
aaggaggacggagtccgagacgtgttgaaggatgtcttattgccgtggtataatgcctat
cgcttcctggtacagaacgtacaaaggttacagaaggaggatgatattcagttcatttac
aatgaaaacacagcgaagcagagtgacaacatcatggacaaatggattcagtcttttaca
cagtccctcatccagttcgtcaaggctgagatggatgtttaccacctgtacaccgtcgtg
cctcgcctggtcaagtttgtggacatgctcaccaactggtacgtgaggaccaacagacgc
cgactgaagggcgagagtggcactgaggactgcctgtgtgcgctggaaaccctcttcagt
gttctgttctccatgtgcaagctgatggctcctttcacacccttcatcacagagatgatg
taccaaaatctgcgtcacctcatcgatcccgcctctgtcgaagagaaggacagcagcagc
atccactacctcatgctgccccaagtcagggagagtgtgattgacaagcgcatcgagagc
gccgtctgtcagatgcagtctgtgattgagctgggccgagtgatccgagacaggaagact
ctgcctgttaagtacccattaaaggaggtggtcgttattcaccaggaccaagaagccctg
aaagacattcagtccctgcagaaatacatcctggaagagctcaatgtgcggcagttgaca
ctatcaacagacaaggacaagtatggtatccgcctgagagccgagccagaccacatggtg
ctgggcaagagactgaagggggccttcaaagccatcactgcttctatcaaggagctcacc
agcgaacagctcgaggccttccggaagaaaggatccatcgaggtggacggccatgagctt
cacgaggaggacctcagactcatatacaccttcgaccagagctctggctcagcagcacag
tacgaagcacactctgattcacaggttctagtgctgttggacgtcagcccggaccagtcc
atgatggatgaaggcgttgcccgagaggtcatcaaccgcattcagaaactacgcaagaag
ggtcatttggtgccatcagatgagataactgtgtactaccgctgccagccagaggggcag
tacttgggctctgtgatccaggctcacaccgactttatcctggccaccaccaaggctcca
ctgttgcccttccccatccccaagactgccagcgtcatcatagaagaaaagactcagctg
aagggttcagacttggagttgaccatagtaaagggatcttcggcccctcaagctctttta
aatggaccagcgtgcacctatgtgaacatcagggtgacggtcaacaacaaggaacaagag
ggcgtggtgctgttggagaacccgaaaggcgacaacagactcaacctggacacgctgaag
aaagtgtgcagcagcatctttcgaaccaaggactcccaactcagagtattcaatggtgga
actgagttgaccagtaaaatggacctccaggctttgagcggctccacggtgtcggtgact
tcaggctcttcctctcctggtttagctcagaccacagacggcctcctgtgcccttatgtt
aacctggtgctctgcaacgcacaaccagctgaatgccagacaggagaggtgggcaccctc
ctgctggtgaacccagtgggtcagaatgggctccactactcaggcctgctgtctgaggcg
gccaaggtgtttgggctccgcagcagacgggttaaactctacctggaccaggacctctcc
caggagctgccagcagattcatctgtaaaatctctagacaccaaaaccctgtttgtgcga
gttcttccaacaactgccgaggcctaa
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