Pseudoliparis swirei (Mariana hadal snailfish): 130208812
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Entry
130208812 CDS
T09868
Symbol
sp1
Name
(RefSeq) transcription factor Sp1 isoform X1
KO
K04684
transcription factor Sp1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04137
Mitophagy - animal
pswi04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
130208812 (sp1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
130208812 (sp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130208812 (sp1)
03029 Mitochondrial biogenesis [BR:
pswi03029
]
130208812 (sp1)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Zinc finger
Cys2His2 SP/KLF family and related proteins
130208812 (sp1)
Mitochondrial biogenesis [BR:
pswi03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
130208812 (sp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
Zap1_zf1
zf-Di19
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
130208812
NCBI-ProteinID:
XP_056294126
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All DBs
Position
18:10640149..10648821
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AA seq
689 aa
AA seq
DB search
MSNQQQGEMAAVESGGGYSQKRNTNSQDSQQPSPLALLAATCSRIDTPGENDSPADQQNQ
QQELDLNQGVFTSSANGWQVIPLSVHTTSGTNTITTDSLGVMAADIGKSRQVSSSAAVIS
TQGQQQQQLQQYVVAQAPSMQGQQMLTTISGMMPNIQYQVIPQFQTVDGQSLQLAHTQQD
SVGSGQQFQIVSSANGQQIIAATNRAGAAGNIITMPSLLQGAIPIQNISLGGNGMLQNQH
QFLANMPVSLNGNITFLPVSTGTSGGGEGNGGGDTGGHQLIQQHPVSSGAGYMTTASTVT
TQAASSYGMTQTHNSNGVVTGTFQQNTASSLGVPIQPDNREGQQPQQILIQPQQIIQGAT
SLQTIQAGTGGQVFATPTLSQEGLQNLQIMPNTGPILLRTVGPNGQVSWQTIQIQSPVGP
QFTLAQMQSLPQLGQSVSAAGGASVNTVQIPGIQTINLNALGGSGLQMHQLQTVPITIAS
STGDQVLHTGGDSLDDGAVMDDGDISPPPQGRRNRREACTCPFCKDGEGRDPTKKKQHIC
HISGCGKIYGKTSHLRAHLRWHTGERPFVCGWSFCGKRFTRSDELQRHKRTHTGEKRFVC
PECPKRFMRSDHLSKHIKTHLNKKAVATSSIAVSSNPGSPTAGTKVGSASDQHTIVTMET
LSPESIARLANSGINMMQVELHQINGNSY
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatcagcagcagggtgaaatggccgctgtggagagcggcggaggctacagtcaa
aagcgaaacacgaattcacaagactcacagcagccatctccgcttgccttgttggcagcc
acatgtagtcgaattgacactccaggagagaacgattcacctgcagaccaacaaaaccag
cagcaagagctggacctaaaccagggtgttttcacctccagtgccaacggctggcaggtt
atccctcttagtgttcacacaacctcaggcactaacactatcaccaccgactccttaggg
gtgatggcagcagacataggcaagagcagacaggtgtcatcttcagcagcagttattagc
actcagggacagcagcagcagcagctacagcaatatgtagtagctcaggctccatcgatg
cagggccagcagatgcttaccaccatatcaggtatgatgcccaacattcagtaccaggtt
attccccagtttcagacggtagatggccagtcactgcagttggcacatactcagcaggat
tctgtaggatcaggccagcagtttcagatagtgtcatctgcgaatggccagcagatcata
gctgcaaccaacagagctggtgctgcaggaaacatcataacgatgcccagtctccttcag
ggagcaatccccatacaaaatataagcttaggaggcaatggcatgttgcaaaaccagcac
cagttcctggcaaatatgcctgtgtcactaaatggaaacatcacttttttgccggtcagc
actggaacaagcggagggggggagggaaatggtggaggggatacggggggacaccaactt
atccagcaacatccagtgtccagtggggcaggttacatgacaactgcgtccactgtcact
acacaggccgcctcttcatatggaatgactcaaactcataacagcaatggagtggtgacc
gggacattccagcagaacacagcatcttctctgggtgtcccgatacagcctgacaacaga
gaagggcagcagccacaacaaatccttatccagcctcagcagattatccaaggggcaaca
tccctccagaccatccaggctggtactgggggtcaggtatttgcaactccaaccctcagt
caggaagggcttcaaaatcttcaaattatgccgaatacaggccccatcctcctgcgcact
gtaggccccaatggccaggtgagctggcagaccattcagatccagagtccggtaggacca
cagttcacgctggcccaaatgcaatctcttccccaacttggccagagtgtgtctgcagct
ggaggagcatctgtcaacacagtgcagatcccaggcatccagaccataaatctcaacgca
ctcggaggctctgggctgcagatgcaccagctgcagactgttcccatcaccatcgctagc
tcgacaggagatcaggtgttgcatacaggcggagacagtttggatgatggcgcagtgatg
gatgatggtgatataagtccaccacctcaaggacgacgtaaccgcagggaagcctgtacc
tgccccttctgcaaggatggagagggacgggatccgactaaaaagaagcagcacatttgt
cacatctctggctgtgggaagatctacggcaagacctcccacctgagggctcacttgcgt
tggcacacaggagaacgacccttcgtctgcggctggtccttttgtggcaaacgatttacc
cgttcagatgagcttcagcgtcataagaggacgcacacgggtgaaaaaagatttgtttgc
ccagagtgccctaaacgcttcatgcgcagcgatcacctctccaagcacatcaaaacccac
ttgaacaagaaagcagtcgccaccagcagcatcgcagtctccagcaaccctggctcccca
acagcaggaacaaaagtcggctcagccagtgaccagcacaccattgtcaccatggaaacc
ttatctccggagagcatagctcggttagccaacagtgggatcaacatgatgcaagtggaa
cttcaccaaattaacggtaacagctactaa
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