Pseudoliparis swirei (Mariana hadal snailfish): 130209271
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Entry
130209271 CDS
T09868
Name
(RefSeq) heart- and neural crest derivatives-expressed protein 1-like
KO
K09071
heart-and neural crest derivatives-expressed protein 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130209271
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
130209271
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Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
Effector_1
HTH_51
Motif
Other DBs
NCBI-GeneID:
130209271
NCBI-ProteinID:
XP_056294807
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All DBs
Position
19:316563..319947
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AA seq
191 aa
AA seq
DB search
MNLIGGYQHHHHLMHEPFPFVQRCHQDAPYFQSWVVNHGEVPPDFQIQAPYPAAEHGAPG
ATHDARLEGLQAGMGKRRTSGPKKERRRTESINTAFAELRECIPNVPADTKLSKIKTLRL
ATSYIAYLMDVLAKDTGETEGFKAEIKKLENRDLKRKREPADGPQEAPGAEKKVKGRTGW
PQQVWALELNQ
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcattgggggctaccagcatcaccaccacctgatgcacgagcccttcccgttc
gtgcagcgctgtcaccaggatgcgccgtacttccagagctgggtggtgaaccacggcgag
gtgcctccggacttccagatccaggcgccgtacccggccgcggagcacggcgcgcccgga
gcgacgcacgacgcccggctggaggggctccaggcgggaatgggcaagcggcggacgtcg
gggccgaagaaggagcgccggcggacggagagcatcaacaccgccttcgcggagctccgg
gagtgcatccccaacgtgcccgcggacaccaaactgtcgaaaatcaaaacgttacgcctg
gcgaccagttacatcgcctacctgatggacgtcctggccaaggacaccggggagaccgag
ggcttcaaggccgagattaagaaacttgaaaaccgggatctgaaaaggaaacgtgagccg
gccgacggcccgcaggaggccccgggagccgagaagaaggtgaagggccggaccgggtgg
ccgcagcaggtctgggctctggagctcaaccagtga
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