Pseudoliparis swirei (Mariana hadal snailfish): 130209516
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Entry
130209516 CDS
T09868
Symbol
kdrl
Name
(RefSeq) vascular endothelial growth factor receptor kdr-like
KO
K05096
FMS-like tyrosine kinase 1 [EC:
2.7.10.1
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04010
MAPK signaling pathway
pswi04020
Calcium signaling pathway
pswi04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130209516 (kdrl)
04020 Calcium signaling pathway
130209516 (kdrl)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130209516 (kdrl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pswi01001
]
130209516 (kdrl)
Enzymes [BR:
pswi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
130209516 (kdrl)
Protein kinases [BR:
pswi01001
]
Receptor tyrosine kinases (RTK)
VEGFR family [OT]
130209516 (kdrl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_3
Pkinase
Ig_VEGFR-1-like_5th
I-set
ig
Ig_2
VEGFR-2_TMD
VEGFR-1-like_Ig-like
VEGFR1-3_N_Ig-like
V-set
Izumo-Ig
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
130209516
NCBI-ProteinID:
XP_056295205
LinkDB
All DBs
Position
19:complement(18139047..18181919)
Genome browser
AA seq
1312 aa
AA seq
DB search
MVSSDCFRLFVVIFGCSSLTNGYLETEHSPKILPSDNPLIRPKDDSLNLICRGHGLLHWT
LGDPSRSNSSEGVKVEQCDSRHHSHSHCSKLTVLSLIVNDTGSYSCKYSKNALEHISSIY
IYVTDPEQPFVEPHHQTYKILGIYRHETSLVVPCRTSSPDAVVTLTGHQPLPEKVIKEMV
WDPKVGFKIPYDPNTEYSMLTCKTIVNGHEFKSMYIPIRTTLVLNNVKISPERVRVLVGD
TLVLNCTGETTYGGRINFTWDFPKKSENQHYTKKTPVRPAQVLVMSKALILPNITMEDKG
VYRCNAEIEPTKHKNISARVLVFEHPFLNVSYKHDRPSKVTVKEGKKKLVFDPKVNALPS
PDMVAWYKDGVPINNNSTCYKMSGYNLIIIDVQQKHAGVFTISLGNQVRGLYRNLSYTLV
VNVKPTISEAELATVDVQPYMLGTQHQLTCTAYGIPLPSITWFWQPCHSDPAFIDCIDYT
KTLLVNIDDRRNYSHNWIKSINVKPQLVKGKNKTVSTLAIGEATVSGKYSCMAQNEDGNS
MMTIPFYVDDHPEEITIEPRAAIEGDDVNLTCWAARYLYKDLHWLDSRNQTITSNVSSLH
ISTYSISLSLHLHNVSQISTSGYKCQAYKLHKKVELKTAALVVDVRKRPWLRQNLTNQDV
NSSSTLMLACFALGVPRPYIMWYKNGVQVEEGPGITLEEEGVLTIERVKKDDEGLYECIA
SNVEGIAKTSAVVTVFGDEGKANVEVIILVCTGAAATFLWLMLILFIRKLRKQPAQYKMG
PSIIIDPDECPLEEQNDLLQYDSSKWEFPRDRLRLGKTLGHGAFGKVVEASAFGIDKLST
CKTVAVKMLKGGATSNERKALMSELKILIHIGHHLNVVNLLGACTKPGGPLMMIVEFCKY
GNLSNYLRGKRDDFLVYRSQDGKVVSSGSGCELSEMMKRRLESVASTGSSASSGFIEDKS
YCDSEEEEEESEDLYKRVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNV
VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPEAIFDKIYTTQSDVWSFGVLIWEIFSL
GASPYPGVQIDEEFFCRLKEGTRMRAPEYSSSEIYQTMLDCWHGEPQERPTFIELVEQLG
DLLQASVQQEGKHYIPINTFLLAKVGELSTTVPSEETPGRPVTPRDSGSTWNIKIRPASV
KTFDEVTMEDGTNENLEGGQSDSGMGLSSDNMETLKRLESLAGRPLSIMALAMKAVSKSK
ESVKSDTEREKFLPPVSSLDFSLDDSALDAGLECHSPPPDYNDVVRYSTPPV
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atggtctcatccgactgtttcagattgttcgttgtcatctttggttgttcatcactcaca
aatggatatttggagacagagcactcgcctaagattctgccctctgacaatcctctcatt
cgacccaaggacgattcgttgaacctaatatgcagaggtcatgggctgctgcactggaca
cttggtgatcccagtcgatcgaactcatcagagggcgtgaaggtggagcagtgtgattcc
cgacatcactctcactcacactgcagcaaactgacagtattaagcttaattgtcaatgac
acaggaagctacagctgtaaatactccaagaatgctttggaacacatcagctccatctac
atctacgtcacagatcccgagcaaccatttgtggagccccatcatcagacatataaaatc
ttgggcatctacagacatgagaccagcctggtggttccctgccggacgtcctctcctgat
gctgttgttacactcacagggcaccaacctttaccagagaaggtcattaaggaaatggtc
tgggatccgaaggttggattcaagattccttacgatcccaacactgagtatagcatgctc
acctgtaaaaccattgtcaacggtcatgagttcaagtcaatgtacatccctataagaacg
actcttgttcttaataacgtgaagatcagcccagagcgtgtcagagtgttggttggagac
accctcgtgctcaactgtacgggtgagacaacctacggtggaagaatcaacttcacatgg
gattttccaaagaagagtgaaaatcaacactatacgaagaagacaccagtccgccctgct
caggttcttgtgatgagcaaggctttaattttgccgaacattaccatggaggataagggg
gtgtaccgctgcaacgctgagattgaacccacgaaacacaagaacatctcagcaagagtc
cttgtctttgagcatccatttctcaatgtctcctataagcatgatcggcctagtaaggtg
actgttaaagaaggtaaaaagaagcttgtgtttgaccccaaggtcaacgctctgccatca
cccgacatggtagcatggtataaggatggggtccctatcaacaataattccacctgttac
aagatgtctggttacaacttgatcatcattgatgtgcagcagaagcatgctggggtcttc
accataagcctgggcaaccaagtgagaggcttgtacaggaatctgagctacaccctggta
gtcaacgtgaaaccaactatttctgaggcagagcttgccacagtggacgtgcagccctac
atgttaggcacacagcatcagctaacctgcactgcttatgggatacccttaccaagcatc
acttggttctggcaaccgtgtcactcagaccctgcgtttatagattgcattgattatacc
aagacactcctggtcaacattgatgacaggagaaattactcccacaactggatcaagagc
ataaatgttaagcctcagctggttaaaggaaaaaacaagactgtgagcaccttggctata
ggagaggctaccgtgtcaggaaagtactcatgtatggcccagaatgaagacggcaacagc
atgatgactatacctttctacgttgatgatcacccagaggaaatcaccattgaacctcgg
gcagccatcgagggggatgacgtcaatctgacctgttgggcagcccgctacctttacaaa
gacctacactggttggattccaggaatcaaacgatcacttccaacgtgtccagtctccat
atcagcacctactccatttctctttctctccatctgcataacgtgtcccaaatcagcaca
tcaggttacaagtgccaagcatacaagctccacaagaaggttgaactcaagaccgctgca
cttgttgtggatgtgagaaaaagaccctggctgaggcaaaatctgacaaatcaagatgtg
aacagtagcagcaccctgatgctggcctgctttgctctgggagttcctcgtccgtacatc
atgtggtataaaaatggtgttcaggtggaggaaggaccaggtatcactctggaagaggag
ggtgttctgaccatcgagagggtgaagaaagatgatgagggtctctacgagtgtatagcc
agcaatgttgagggtattgcaaaaaccagtgctgttgttactgtgtttggggacgaaggg
aaggcgaacgttgaggtaatcattttggtgtgtacgggagctgcagccacgttcctctgg
ctcatgcttatcctcttcatccgcaagctaaggaagcaaccggcccaatataagatggga
ccgtctatcatcattgaccctgacgagtgtccactcgaggagcagaatgatcttcttcag
tacgacagcagtaaatgggagtttccccgggaccgacttcgactaggcaaaactcttggc
catggagcatttggaaaagtggtggaagcttctgcctttgggattgacaagctctcaacc
tgcaagacggttgctgtcaaaatgttgaaaggaggcgctacgtcaaatgagcggaaagct
ctgatgtcagagttaaagatcctgatccacattggccatcacctgaacgtggtcaacctg
ctgggagcgtgcacgaagcctggaggcccattgatgatgatagtggagttctgcaagtac
ggcaacttgtccaactatttgagaggcaagagagatgactttctcgtctacaggagccag
gacggtaaggtggtgtcgtcgggatcgggctgcgagctgagcgagatgatgaagcgccgc
ctggagagcgtggccagcaccggaagctcagccagctctggcttcatcgaagataagagc
tactgcgactcagaggaagaggaagaagaatcagaggatttatataagagagtcctgacg
ttggaggatttgatctgctacagtttccaagttgcaaaaggcatggagttcttggcttca
cgcaagtgcatccatcgtgatttggctgcacgaaacatcttgctatctgagaataatgtt
gtgaagatttgtgattttggacttgccagagacatctacaaagacccggattatgttcgc
aaaggagatgccagactgccgctcaagtggatggcacctgaggccatttttgacaagatc
tacacgactcagagtgacgtttggtcctttggagttctcatatgggagatcttctcgctg
ggtgcctccccgtaccccggcgtccaaattgacgaagaattcttctgccggctgaaagaa
gggaccaggatgagagcaccagaatactcttcttctgaaatatatcagaccatgttggac
tgctggcatggggagccacaggagcgaccgaccttcattgagctggtggaacagctggga
gatctgcttcaggccagcgtgcaacaggaggggaagcactacatacccatcaacactttc
ctgctggcgaaggtgggagagctgtccaccactgtgccgtcagaggagacgcccggacga
cctgtaaccccccgtgactcagggagcacatggaacatcaagattcgtcctgctagtgtg
aaaaccttcgacgaggttaccatggaggacgggaccaatgagaacctggagggcggtcag
tcagacagcgggatgggcctgtcgtctgacaacatggagactctgaagcgcctcgaatcc
ctggctggccgaccgctgagcatcatggctctggcgatgaaggcggtgagtaagagtaaa
gagtctgtaaagagtgacacagagagggagaagttcctcccccccgtttcctctctggac
ttcagtctggacgactcggccctggacgctggtctggagtgccacagcccgccgcctgac
tacaacgacgtggtgcgctactccacccccccggtgtaa
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integrated database retrieval system
