Pseudoliparis swirei (Mariana hadal snailfish): 130209622
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Entry
130209622 CDS
T09868
Symbol
gria2b
Name
(RefSeq) glutamate receptor 2b isoform X1
KO
K05198
glutamate receptor 2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04080
Neuroactive ligand-receptor interaction
pswi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130209622 (gria2b)
04082 Neuroactive ligand signaling
130209622 (gria2b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pswi04040
]
130209622 (gria2b)
Ion channels [BR:
pswi04040
]
Ligand-gated channels
Glutamate (ionotropic)
130209622 (gria2b)
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GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Peripla_BP_6
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
130209622
NCBI-ProteinID:
XP_056295363
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Position
19:23936763..23989774
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AA seq
897 aa
AA seq
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METIVNLSLSVLLVLWGCALGGSPSVQIGGLFPRGADQEYSAFRIGMVQFGTSEFRLTPH
IDNLEVANSFAVTNCFCSQFSRGVYAIFGFYDKKSVNTITSFCGTLHVSFITPSFPLDGH
QQFIIQMRPDIKGPLLSLIEYYKWDKFAYLYDSDRGLTTLQVVLDTAAERKWQVTAINVG
NLKDEKKDEAYRSLFQDLENKKERRVILDCEQDKVKDIMEQVITIGRHVKGYHYIIANLG
FIDGDLTKIQYGGANVSGFQIVDFEDPLVAKFDQRWEALEEKEYPGADSKIKYISALTYD
AVQVMTEAFRYLHKQRIDFTRRANTGDCLANPAVPWAQGVEIERALKQVRVEGLTGNIQF
DQHGKRVNYSVNIMELKTNGPMKIGYWNEVDKMAVTKSDVFANDSTGMENKTVIVTTILE
APYVMLKKNSDLFVDNERYEGYCVDLAAEIAKHCGFKYQLKIVSDGKYGARDAETKIWNG
MVGELVYGKADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLA
YEIWMCIVFAYIGVSVVLFLVSRFSPYEWHTEEYEDGQIQTNESTNEFGIFNSLWFSLGA
FMRQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQS
EIAFGTLDSGSTKEFFRRSKIALFDKMWTYMRSAEPSVFVKTTAEGVVRVRKSKGKYAYL
LESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLRNAVNLAVLKLNEQGLLDKLK
NKWWYDKGECGSGGGDSKEKTSALSLSNVAGVFYILVGGLGLAMLVALIEFCYKSRAEAK
RMKMTFGDAMRNKARLSVTGSTGENGRVMTPEFPKAVHAVPYARPDMGLNGSLTDLS
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgatagtgaatttatccctgtccgtgctgctggttttgtggggatgcgcgctc
ggaggctcgcccagtgttcaaatcggaggactctttccgaggggcgcggatcaagagtac
agcgcatttcgaatagggatggttcagtttggcacctcggaattcagactgacgccccac
attgacaacctggaagtggccaacagtttcgctgtaaccaactgcttctgttcacagttc
tccagaggagtgtacgccattttcggattctacgacaagaagtccgtgaacaccatcacg
tcgttctgcgggacgctccacgtctctttcattacgcccagcttccccctggatgggcat
caacagttcatcatccagatgagacccgatatcaaagggcccctcctcagcctgatcgag
tactacaagtgggacaagttcgcctacctctacgacagtgaccgaggtctaacaacgctg
caggtggttctggacacagcagcagagaggaagtggcaagtgaccgcgatcaacgtggga
aacctgaaggacgagaagaaggatgaggcctaccgctctctgttccaagatttggagaac
aaaaaagagaggagggtgatcctggactgtgaacaggacaaagtcaaagacatcatggag
caggtcatcacaattggcagacatgttaaaggctaccactacatcatagcaaatctggga
ttcattgatggggatctaaccaaaatccagtatggcggtgcaaacgtgtccggatttcag
attgttgattttgaggatcctttagtggccaagtttgaccagagatgggaggccctcgaa
gaaaaggagtatcctggtgccgacagcaaaataaagtacatatcggcgttgacctacgac
gccgtgcaggtgatgacggaggccttccgctacctgcacaaacagcgcatcgacttcacc
aggagagccaacaccggcgactgcctggccaatcccgccgttccgtgggctcagggagtg
gagatcgaacgcgcgctgaaacaggttcgtgtggaaggcctgacaggaaacatccagttc
gatcagcatggcaagcgagtcaactactcagtgaacatcatggaattaaagaccaacggt
cccatgaagattggatactggaatgaagttgacaaaatggccgtcaccaaatcggatgtc
tttgcgaatgactcgacgggaatggaaaacaaaacagtcattgtcaccaccatcttggaa
gctccgtatgtaatgctgaaaaagaactctgacctttttgtcgacaatgagcgctacgag
ggttactgtgtggatctggccgcggagatagcgaagcactgcggcttcaaataccaactg
aagatagtgtcggatgggaaatacggagccagagatgccgagaccaagatctggaatggg
atggttggagagttggtgtacgggaaagcagacatcgcagtggctcctctgaccatcacg
ttggtccgagaggaggtgatcgacttctccaaacccttcatgtctctgggaatctccatc
atgataaagaagcctcagaaatccaaaccgggagtcttctctttcctggaccctctggcc
tacgagatctggatgtgtatcgtttttgcctacatcggcgtcagcgtggtgctgttcctc
gtcagccgtttcagcccgtacgagtggcacactgaggaatacgaggacgggcagatccag
accaacgagtcgactaacgagtttggcatattcaacagtctctggttctccctcggagcc
ttcatgcgccaaggatgtgacatctcacccagatctctctctggacgcattgttggtggc
gtttggtggtttttcacgttaatcatcatctcctcctacaccgctaacctggctgctttc
ctaactgtcgagaggatggtctcccccattgagagtgcagaagacctggcaaaacagagc
gagatagcctttgggactctggattctggctctactaaagagttctttaggcgctcaaaa
attgccctctttgacaaaatgtggacatacatgcgcagtgcggagccctccgtgtttgtg
aaaaccaccgccgagggggtcgtgagggtccgcaagtccaaggggaagtacgcctacctg
ctggagtccaccatgaacgagtatatcgagcagcgaaaaccctgcgacaccatgaaggtg
ggaggcaacctggactccaaaggctacgggatcgccacgccgaaaggatcctcattaaga
aatgcggttaacctcgcagtactaaaactgaatgagcaaggcctgttggacaaattgaaa
aacaaatggtggtacgacaaaggagagtgcggcagcgggggaggtgattccaaggagaag
acgagcgccctcagcctgagcaacgtggctggggtcttctacattctggtcggaggactc
ggtctggccatgctggtggccttgatcgagttctgttacaagtcccgagccgaggcgaaa
cgaatgaagatgacctttggggacgccatgaggaacaaagcgagactttccgtcactggg
agtactggggagaatggtcgggtgatgactccagagtttcctaaagctgtccacgccgtc
ccgtacgcgagacccgacatgggactaaacggcagcctgacagatctgtcctga
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