Pseudoliparis swirei (Mariana hadal snailfish): 130210120
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Entry
130210120 CDS
T09868
Symbol
xiap
Name
(RefSeq) E3 ubiquitin-protein ligase XIAP
KO
K04725
E3 ubiquitin-protein ligase XIAP [EC:
2.3.2.27
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04120
Ubiquitin mediated proteolysis
pswi04210
Apoptosis
pswi04217
Necroptosis
pswi04510
Focal adhesion
pswi04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130210120 (xiap)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
130210120 (xiap)
04217 Necroptosis
130210120 (xiap)
09144 Cellular community - eukaryotes
04510 Focal adhesion
130210120 (xiap)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
130210120 (xiap)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pswi01002
]
130210120 (xiap)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130210120 (xiap)
03029 Mitochondrial biogenesis [BR:
pswi03029
]
130210120 (xiap)
Enzymes [BR:
pswi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130210120 (xiap)
Peptidases and inhibitors [BR:
pswi01002
]
Peptidase inhibitors
Family I32: IAP family
130210120 (xiap)
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130210120 (xiap)
Mitochondrial biogenesis [BR:
pswi03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
130210120 (xiap)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BIR
zf-C3HC4_3
Cluap1
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
130210120
NCBI-ProteinID:
XP_056296073
LinkDB
All DBs
Position
19:3241713..3246638
Genome browser
AA seq
454 aa
AA seq
DB search
MCDLGQDSNLETDDYTADYSQMNRRLDSFRGSGLAQLVPAENLARAGFYFTGPDDRVRCF
SCQKTVENWCMGDAPVERHKEVSPSCSFLICTHRTNFNLRCENRMTNGSTSSEEAEDMEY
RLRTGEVVDESTYPMAPHMRSEEARLQTLSSWPSTAPVRPRDLAQAGLYYLGVGDRVQCF
CCGGMLAGWEPGDVAWAEHTKHFPYCFFILGHDVGNVPFQGGTEDSGSRQHANARVPMGR
LEERLSSFTGVLHPIDHERLATAGFYSAGLGEDKVLCFCCDGGLKGWQPEEDPWEEHAKH
YPGCSFLLAEKGQEFVNTIQLQDPRRNRAASFSGQGNEVLQSAMAQKAIETGLEPSVVEK
TILEKINQTGSSHSSLEELMEDCQNNSQELDEDPLKKLRELQREKQCKICMDRDIAVVFI
PCGHLVACKKCSELLVKCPICCGAIMQKIQTYIA
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgatctcggacaagacagcaacttggagacggacgactacacggcggattattcc
cagatgaaccgccgcctagactcattccgcggctccggtttggcccagctggtcccagca
gagaacttggcccgggccggtttctacttcactggccctgacgatcgtgtccgctgtttc
agttgccagaagacggtggaaaactggtgcatgggagacgcacctgtggagagacataaa
gaggtttccccatcatgcagctttctcatctgcacccaccgcaccaacttcaacctcaga
tgtgaaaacaggatgaccaacggctccacgtccagcgaagaagcggaagacatggagtat
cgcttgaggacaggagaggtggtcgatgagtccacctacccgatggcccctcacatgaga
agtgaggaggccaggcttcagaccctctcttcttggccctctactgctcccgtgagaccc
agagatctggcacaggccggcctctactacctcggcgtgggcgaccgggtgcagtgcttc
tgctgcggtggcatgctggctggttgggaaccgggggacgtcgcctgggcggaacatacc
aaacatttcccctactgcttcttcatcctcggtcacgatgtgggcaatgtcccattccag
gggggtacggaagatagcggcagcagacaacacgcaaacgctcgcgtccctatggggagg
ttggaggagaggctgagcagctttacaggtgtcttgcaccccattgaccacgagaggctt
gccacagctggcttctacagtgcagggcttggagaagacaaggtgttgtgtttctgctgt
gatggaggcctgaaaggctggcagcctgaagaagacccttgggaagaacatgccaaacat
taccctggatgcagcttcttgctagcagaaaaaggacaagaatttgtcaacactatccag
ctacaagacccacggcggaatagagctgcttcattttcgggacaagggaatgaggtgctg
cagtcggccatggctcagaaggccattgagacgggtctggagcccagtgtggtggagaag
accatcttggagaaaatcaaccagacgggctccagccactcctccctggaagaactcatg
gaggattgtcagaacaactcacaggagctagatgaggaccccctgaagaaactgcgggag
ctgcaaagggagaaacagtgcaaaatatgtatggacagagatattgctgtcgtcttcatc
ccgtgcggacatctggtcgcctgtaagaagtgttcggagttgctcgtcaagtgtccgatc
tgctgcggagccataatgcagaagatccagacctacatcgcataa
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