Pseudoliparis swirei (Mariana hadal snailfish): 130211140
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Entry
130211140 CDS
T09868
Symbol
fkrp
Name
(RefSeq) fukutin-related protein
KO
K19873
fukutin-related protein [EC:2.7.8.-]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00515
Mannose type O-glycan biosynthesis
pswi01100
Metabolic pathways
Module
pswi_M00872
O-glycan biosynthesis, mannose type (core M3)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00515 Mannose type O-glycan biosynthesis
130211140 (fkrp)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pswi01003
]
130211140 (fkrp)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130211140 (fkrp)
Glycosyltransferases [BR:
pswi01003
]
Glycan extension
O-Glycan
130211140 (fkrp)
Membrane trafficking [BR:
pswi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
130211140 (fkrp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FKRP_N
LicD
Motif
Other DBs
NCBI-GeneID:
130211140
NCBI-ProteinID:
XP_056297762
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Position
20:complement(23648236..23651530)
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AA seq
533 aa
AA seq
DB search
MRISLCQGLLTGAIVLNLLILYYVSRTQQQMMDKRKELGRGGPRRAALPASGLDGGLGAP
GGAGGDPGVVGGDGHGRGPRVTVLLREFENFENYVGDVANSFLRQRPELPFLAVADESPY
PPLVLPEGARLLVLSPSPDQPPQAHRPEFHVQTEFVLLVPDGVELEQPRAIERLIRELEG
EGGGPVRLVAAPVLTRSAVQCLHLRVNLREWTATYSPAASGSSGSVCSALQGDAVVLVRT
EDLFNLSVPVGRPLFPSLFVQTALRGWKVKLLESPCFAANHRPLFSSAHNQWKADTRLKE
ATGKLMRSFGLKRLLLPDGKEQWYGCSKETPRCFGTVQDDTPDYLYLDRWTPPCCLRALR
ETTKYVINILETSGVRYWLEGGTLLGAVRHQDIIPWDYDVDLGIYLEDVPNCDHLKNLDS
GSLVDANGYVWERAVEGDFFRVQYSEANHLHVDLWPFYPRNGVMTKDTWTEHKQDVEFPE
HFLQPLVPMAFAGVTAYSPNNHRGFLELKFGEGVIENPQYPNPSKKRLDRSKL
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcagtctctgccaaggcctgttgactggtgccatcgtcctcaacctcctcatc
ctgtactatgtgtcccgcactcagcagcaaatgatggacaagaggaaggagctcggcagg
gggggcccgaggagggccgcccttccggcctccggtctggacggaggcctcggggcgccc
ggcggagccggcggtgaccccggagtggtcggaggggacggacacggccgcggcccgcgt
gtcaccgttcttctcagggagtttgagaactttgagaattacgtcggggacgtggcgaac
tctttcctccgccagagacccgagctccccttcctggccgtggccgacgagtctccgtac
cctcccctggttcttccggagggggcccgccttctggtcctctcccccagcccggaccag
cccccgcaagcccacaggccggagttccacgtccagacggagttcgtgctgctggtgccc
gacggggtggagttggaacaacctcgggccatcgagcggctgatcagggagctggaaggt
gagggcgggggccccgtcaggctggtcgccgcacccgtgctgactcgctccgccgtgcag
tgtctccacctgcgggtgaacctcagggagtggacggccacctactcgccggccgcgtcg
gggagcagcgggagcgtgtgttcggctctccagggcgacgccgtggtcctcgtccgcacc
gaggacctcttcaacctctcggtgcccgtggggcggcccctcttcccctcgctcttcgtc
cagacggccctgagaggctggaaggtcaagctcctggagagcccctgtttcgccgccaac
caccggcccctcttcagctccgcccacaaccagtggaaggccgacactcggctgaaggag
gccacggggaagctgatgaggagcttcggtctgaagcgcctcctgctgcccgacgggaag
gagcagtggtacggctgcagcaaggagacgccgcgctgcttcggcacggtgcaggacgac
actccggattacctctatctggaccgctggacgcctccgtgctgcctgcgtgcgctcagg
gaaaccaccaagtacgtcatcaatatcctggagacctcgggcgtgcgctactggctggag
ggcgggaccctgctgggcgccgtccgccaccaagacatcatcccgtgggattacgacgtg
gacctgggcatctacctggaggatgtgcccaactgcgatcacttgaagaacctggactcg
ggctccctcgtggatgccaacggctacgtgtgggagcgggcggtggagggagacttcttc
agggtccagtacagcgaggccaaccacctccacgtggacctgtggccattctatccacgt
aacggcgtcatgaccaaagacacgtggacagagcacaaacaggacgtggagttcccggag
cacttcctgcagccgctggtgcccatggctttcgccggcgtgacggcgtacagccccaac
aaccaccgaggcttcttggagctcaagttcggggagggggttatcgagaacccgcagtat
cccaacccctccaaaaagaggctggacagaagcaaattatga
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