Pseudoliparis swirei (Mariana hadal snailfish): 130211820
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Entry
130211820 CDS
T09868
Symbol
nectin4a
Name
(RefSeq) nectin-4 isoform X1
KO
K06593
poliovirus receptor-related 4
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
pswi04517
IgSF CAM signaling
pswi04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
130211820 (nectin4a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
130211820 (nectin4a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
130211820 (nectin4a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pswi04515
]
130211820 (nectin4a)
Cell adhesion molecules [BR:
pswi04515
]
Immunoglobulin superfamily
Nectin family
130211820 (nectin4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
V-set
Ig_2
I-set
ig
C2-set_2
TMEM154
LST1
FAM176
EphA2_TM
LapA_dom
Motif
Other DBs
NCBI-GeneID:
130211820
NCBI-ProteinID:
XP_056298785
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All DBs
Position
21:13846412..13864258
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AA seq
617 aa
AA seq
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MTPLPTGLCLCVLWIFVTVTRGNFVDLPLKDPILSMAEEETVLPCRYQPTGGNTVVQVTW
YKQKQQIITAHHVNGQTAFGTWSQRVRFKNSEPTLDSSLVIMSTEVSDEGKYLCRISTFP
SGNFDRDMSVVVWTVPISSLDPVVLVEGQSYRQAASCRSVARPPPRLTWDTDLNGQAVDR
SSDNGAVSSHFSLHPLRNMNGKTLDCLVWHPTMTDPRRLTNQLVVHFPPHAEVSGFNGDW
AVGLENVALRCVSGGNPKPQSFTWIRIGGELPEGVIPHPNGTLAFGRPLSQSDGGTYQCV
AKNGVGVGKAEVNIGVAESSPPSSLMEKMLMIIMGGVAGGLLILMLIVVITLTCHHKRKN
KKLEKELTVRKEEISTLSRQASFRRVNSVSTDARGTTEESIPLRAEGTMRTSMSSLGEQA
NCRDSPSTVSGGRGGGGGGGVGGAFDYLGRPVLHNNTRRGRDSRPLDREEESRLRVETYV
RNSAISFQETRFHPPLLPSAFQLVQSTEIVRQLNGSAIMPADGGSRPGSVAKNHQQPPLS
RSYPAVTDDEDEVDEGLGGPASQEHPDDQYSETNSSQVSEAHSTRYLQTNGTLRPKRQPS
PTVVSPHASLVHKAQIV
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgacacctctgccgaccggcctgtgtctctgtgtcctctggatctttgtgacggtgaca
cggggcaactttgtggatctcccgctcaaagatcccatcctctccatggcggaggaggag
accgtcctgccctgtcgctaccagcccactgggggcaacacggtggtgcaggtcacctgg
tacaagcagaagcagcagatcatcaccgcacaccacgttaatggacagacagcattcggg
acgtggtctcaacgcgtgcgcttcaaaaacagcgagcccacgctggactcgtctctggtc
atcatgagcacggaggtctccgatgaggggaaatacctctgccgcatcagcaccttcccc
tccggcaactttgaccgagacatgtccgtcgtggtgtggaccgttcccatctcctccctg
gaccctgtggttctggtggaggggcagtcctaccgacaggccgcctcctgtcgctccgtg
gcccgcccgcccccccgcctcacctgggacaccgacctgaacggccaggcggtcgaccgc
tcctccgacaacggggcggtctcctcgcacttctccctgcaccccctgaggaacatgaac
ggcaagacgctggactgcctggtgtggcaccccaccatgacggacccccgcaggctcacc
aaccagctggtggtgcacttccctccacacgcagaagtgtctggcttcaatggagactgg
gctgtaggtttggagaacgttgccctgaggtgtgtgagtggaggaaaccccaaaccacag
agtttcacctggatcaggattgggggagagctgcccgaaggtgtcatcccccaccctaat
ggaacactagcttttgggagacccctaagccaatcagatggaggcacctaccagtgcgtg
gcgaagaacggcgtgggcgtggggaaggcggaggtgaacattggtgtggcagagtcgtcg
ccgcccagcagcctgatggagaaaatgctgatgatcatcatggggggggtggcggggggg
ctgctgatcctgatgctcatcgtggtcatcaccctcacgtgtcaccacaaacgcaagaac
aagaagctggagaaggagctcactgtgaggaaggaggaaatcagcactctctccaggcaa
gcgtcgttcaggagggtgaactccgtcagcacggacgccagaggaacgacggaggagagc
attcctctgagggcggagggaaccatgaggaccagcatgtcctccctcggggagcaggcc
aactgcagggacagcccctccaccgtgtcggggggccggggaggaggaggaggaggagga
gtaggaggagcgttcgactacctgggccggccggtgctgcacaacaacacgcgccggggg
cgagacagcaggcctctggaccgagaggaggagagccgcctccgagtggagacatacgtg
aggaacagcgccatttctttccaggaaacccgtttccaccctcccctcctgccgtcggcc
ttccagttggtgcagtccaccgagatcgtccggcagctgaacggcagcgccatcatgccg
gcggacgggggttcgaggccgggaagcgtcgccaagaaccaccagcagcctcctctgagc
cgcagctacccggcggtgacggatgacgaggatgaagtggacgagggtctggggggtccc
gccagtcaggagcatcccgacgaccagtacagcgagaccaacagctcccaggtgtccgag
gcgcacagtacccgctacctgcagactaacggcacactgaggcccaaacgccagccgagc
cccaccgtggtcagtcctcacgcctccctggtccacaaggcccagatagtttag
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