Pseudoliparis swirei (Mariana hadal snailfish): 130211976
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Entry
130211976 CDS
T09868
Symbol
sepsecs
Name
(RefSeq) O-phosphoseryl-tRNA(Sec) selenium transferase
KO
K03341
O-phospho-L-seryl-tRNASec:L-selenocysteinyl-tRNA synthase [EC:
2.9.1.2
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00450
Selenocompound metabolism
pswi00970
Aminoacyl-tRNA biosynthesis
pswi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
130211976 (sepsecs)
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
130211976 (sepsecs)
Enzymes [BR:
pswi01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.2 O-phospho-L-seryl-tRNASec:L-selenocysteinyl-tRNA synthase
130211976 (sepsecs)
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Motif
Pfam:
SepSecS
Beta_elim_lyase
Aminotran_1_2
Pyridoxal_deC
Motif
Other DBs
NCBI-GeneID:
130211976
NCBI-ProteinID:
XP_056298992
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Position
21:8778823..8788563
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AA seq
487 aa
AA seq
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MNSENFSLSEKIVSTAYVRQGSQARRGHEQLIRQLLEQGKCPEEGWSESTVELFLSELAV
MDSNNFLGNCGVGEREGRVASGLVARRHYRLMHGIGRSGDIAAIQPKAAGSSLLNKLTNS
VVLDILKLSGVRSVASCFVVPMATGMSLTLCFLTLRHRRPKARYIVWPRIDQKSCFKAMI
TAGFEPVVVENVLEGDELRTDLEAVERKIEELGAENILCVHSTTSCFAPRVPDRLEELAA
MCAKHNIPHIVNNAYGVQSTKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFDE
SFIQEISQMYPGRASASPSLDVLITLLTLGASGYKKLLSERKEMYLFLAQELKSLASAHG
ERLLHTPHNPISLAMSLDGLQAESDKAVTQLGSMLFTRQVSGARVIPLGQEQTVSGHTFH
GFMSHSEAYPCPYLNAASAVGIAREDVTLCIKRLDKCLKTLKKEGNAAKSSSPAAPSGEG
TLLENDQ
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtgaaaacttcagcctgagtgagaagatagtgtcgaccgcctacgttcgacag
gggagccaggcacgccgcggccatgagcaactcattcgacaattactggagcagggcaag
tgtccagaggagggctggagtgagagcaccgtcgagctcttcctgagtgagctggctgtg
atggacagcaacaacttcctcggcaactgtggcgtcggagagagggagggccgggtggcc
tccggcctcgtggccagacgacattacaggttgatgcacggcatcggtcggtccggtgac
attgctgctattcagcccaaagctgcgggatccagtctgcttaacaagctgaccaattcc
gtggtgttggacatcctcaagctctcaggtgtccggagtgtggcgagctgcttcgtagtt
cccatggcaacaggaatgagcttgactctgtgcttcctgactcttcgtcatcgaagaccc
aaagcccgctacatcgtttggccacgcatcgaccagaagtcctgtttcaaagccatgatc
acggcaggctttgaaccggtggtggtggagaatgttcttgagggcgacgagctgcggacg
gatttggaagcggtcgagcgcaagatcgaagagctcggagccgagaacatcctgtgtgtt
cattcgacgacgtcctgcttcgccccgcgcgtgcccgacaggcttgaggaactggctgct
atgtgtgccaaacacaatatcccccacatagttaacaatgcatacggcgtgcagtcgacc
aaatgcatgcaccttatacaacagggggctcgagttggaaggatcgatgcctttgttcag
agcctggacaagaacttcatggttccagtaggtggcgccattatcgcaggttttgacgag
tccttcatacaggagataagccagatgtaccccggtcgagcatcagcttcaccttccctt
gacgtcctcattaccctcctcactctgggagccagtggctacaagaaactgttgtcggaa
agaaaggagatgtatttgttcctggcccaggagctcaagagtctagcctcagctcacggg
gagaggttgctccacaccccacataaccccatttccctggccatgtctctggatggcctc
caggccgagagtgacaaggcggtgactcagctgggctccatgttgttcacccggcaggtg
tcaggagccagggtaatcccgctgggtcaggagcagaccgtaagcggtcacacgttccac
ggcttcatgtcccactccgaggcgtacccctgtccctaccttaatgccgcctcagccgtg
ggcatcgctcgggaggatgtgacgctgtgcatcaaaaggctggacaagtgcctgaagacc
ctgaagaaagagggaaatgctgcgaagagtagttccccggcagccccatcgggggagggg
acactactggagaatgaccaataa
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