Pseudoliparis swirei (Mariana hadal snailfish): 130212044
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Entry
130212044 CDS
T09868
Symbol
plod3
Name
(RefSeq) multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3
KO
K13646
lysyl hydroxylase/galactosyltransferase/glucosyltransferase [EC:
1.14.11.4
2.4.1.50
2.4.1.66
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00310
Lysine degradation
pswi00514
Other types of O-glycan biosynthesis
pswi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
130212044 (plod3)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
130212044 (plod3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pswi01003
]
130212044 (plod3)
Enzymes [BR:
pswi01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.4 procollagen-lysine 5-dioxygenase
130212044 (plod3)
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
130212044 (plod3)
2.4.1.66 procollagen glucosyltransferase
130212044 (plod3)
Glycosyltransferases [BR:
pswi01003
]
O-Glycan biosynthesis
O-linked Gal type
130212044 (plod3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2OG-FeII_Oxy
2OG-FeII_Oxy_3
Anp1
DUF6492
Motif
Other DBs
NCBI-GeneID:
130212044
NCBI-ProteinID:
XP_056299129
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All DBs
Position
21:complement(2020701..2038952)
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AA seq
731 aa
AA seq
DB search
MLSARLLLAVVFFHSSVLADQRRLSPENLLVITAATEETDGFNRFMRTAKEFSYNVKVLG
LGEQWKGGDVARTVGGGQKVRWLKAELLKHSDNKDMVVMFVDSYDVIFASGPEELLSKFS
GLGHRVVFSAEGFCWPDQRLASRYPEVHSGKRYLNSGGFMGFASDVSSMVQQWKYKDNDD
DQLFYTKIYLDKKQRANFNMTLDHRSQIFQNLNGAVEEVVLKFERSRVRARNVAYDSLPV
IIHGNGPTKLQLNYLGNYVPSAWTFEDGCGVCEDQLLDYSHAPDQDMPLVYVAVFIEHST
PFMDEFLERLTTLNYPPQRLRLFIHNNVVYHELHIQRFWERHRARFPEAVLVGPEENLQE
NQARTMAVEACKKDPQCDYYFSIDSDVALTNRDTLRTLIQENKSVVAPMLSRHGKLWSNF
WGALSPEGFYSRSEDYIEIVQAKRTGLWNVPYITQAYLIRGRVLRAQLAQVSLYVDEGQD
PDMVFCRSIRDQGVFMFVSNRDEFGRLVASASYNTSRLHPDMWQIFDNPLDWREKYISED
YAKIFEDEKNLVEQPCPDVYWFPAFSEKMCDHLVETMEHNGQWSGGAHKDERLAGGYESV
PTVDIHMSQISFEKEWLKFLKEYIVPVTERLYPGYYPKAQAIMNFVVRYRPDEQPSLRPH
HDSSTFTINIALNSKDVDYEGGGCRFLRYDCQVESPRKGWSFMHPGRLTHYHEGLPTTRG
TRYIMVSFVDP
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgttgtccgctcggctcctgctggctgtcgtcttcttccacagctccgtgttggccgac
cagcgccggctctctccagaaaatctgcttgtgatcaccgcggcaacggaggagactgat
ggcttcaatcgcttcatgaggacggccaaagagttcagctacaatgtgaaggtcctgggt
ctgggggagcagtggaaaggtggtgacgtggctcggaccgtgggtggaggtcagaaggtc
agatggttgaaggcggagcttctcaaacactccgacaacaaggacatggttgtcatgttc
gtggacagctacgacgtgatcttcgcctccggcccagaggagctgctctccaagttctct
ggtctgggccaccgggtggtgttctcggcggaggggttctgctggcccgaccagaggctg
gcctccagatacccagaggtgcattctgggaaacgctaccttaactcaggagggttcatg
ggctttgcttcagacgtcagttcgatggtccaacagtggaaatacaaagacaacgacgac
gaccagctgttctacaccaagatctacctggacaagaagcagagggccaacttcaacatg
actctcgaccatcgttcccaaatcttccaaaatctgaatggagctgttgaggaagtggtg
ctgaagtttgagaggtcaagggtcagagccaggaacgtcgcctacgactcacttcctgtc
atcatccacggcaacggccccaccaagctgcagctcaactacctggggaactacgtcccc
tcagcctggaccttcgaggacggctgtggggtctgcgaggaccagctgctggactacagc
cacgccccggaccaggacatgcccctggtctacgttgctgtcttcatcgagcattcgact
cccttcatggacgagttcctggagcggctgaccacactcaactacccgccgcagaggctc
cgcctcttcatccacaacaacgtggtgtaccacgagctccacatccagaggttctgggag
cgtcacagagcccggttccccgaggccgtgctggtgggcccagaggagaacctgcaggag
aaccaggccagaaccatggctgttgaggcgtgtaagaaggaccctcagtgtgattactac
ttcagcatcgactctgacgtggccctcaccaaccgggacacgctgaggaccctcatccag
gagaacaagtcagtcgtggcccccatgctgtcccgccacgggaagctgtggagtaacttc
tggggcgctctgagtcctgaagggttctactcgcgctccgaggactacatcgagatcgtc
caggccaagaggacgggcctctggaacgtgccctacatcacgcaggcctacctgatccgg
ggccgcgtgctgcgggcccagctggcccaggtgagcctctacgtggacgagggccaggac
cccgacatggtgttctgcaggagcatcagggaccagggcgtcttcatgttcgtgtctaac
cgggacgagtttggccgcctggtggcgtcggccagctacaacacgtccagactgcacccc
gacatgtggcagatctttgacaacccgctggactggagagagaagtacatcagtgaagac
tacgccaagatctttgaggatgagaagaacctcgtggagcagccctgtccagatgtttac
tggttccctgccttctctgagaagatgtgtgaccacctggtggagaccatggagcacaat
ggccagtggtcaggaggagctcacaaggacgagcgtctggccggtggctatgagagcgtc
cccaccgttgatatccacatgagtcagatcagctttgagaaggagtggctgaagttcctc
aaggaatacatcgtccccgtcacggagaggctgtacccaggctactaccccaaggcccag
gccatcatgaacttcgtggtgcgctaccgtcccgacgagcagccgtctctgcggccgcac
cacgactcctccaccttcaccatcaacatcgccctgaacagtaaagacgtcgactacgag
ggggggggctgccggttcctgcgttacgactgtcaggtggagtctccgaggaagggctgg
tccttcatgcacccgggccgcctgacccactaccacgagggcctgcccaccaccagaggg
acccgctacatcatggtgtcattcgtagacccctag
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