KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130212613
Entry
130212613         CDS       T09868                                 
Name
(RefSeq) H-2 class II histocompatibility antigen, E-S beta chain-like isoform X1
  KO
K06752  MHC class II antigen
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04145  Phagosome
pswi04514  Cell adhesion molecules
pswi04672  Intestinal immune network for IgA production
pswi05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    130212613
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    130212613
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    130212613
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    130212613
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pswi04147]
    130212613
Exosome [BR:pswi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   130212613
  Exosomal proteins of epithelial cells
   130212613
  Exosomal proteins of breast milk
   130212613
SSDB
Motif
Pfam: C1-set C2-set_2 MHC_II_beta C2-set_3 DUF3953 Ig_3
Other DBs
NCBI-GeneID: 130212613
NCBI-ProteinID: XP_056299655
LinkDB
Position
22:complement(12512895..12515592)
AA seq 245 aa
MPVHSFFSLLFLLLLCSRADAFFGHAVIRCQFNSLDDIVYLAQYHFNKMLMLQFNSTLGN
YTGYTKRSKEVADTLNNIPTFIKREEKNLKTCQSHASMVFDLLSNPVEPSVRLKSADAAG
SKHQRMLICSVHGFYPKHIRVTWQKNGNNVTSDVTSTDELSNGNWLYQIHSYLEFTPKTG
EKITCMVEHASLTEPKLYEWDPTVESQRNKFAVGTAGLLLGLVFLVTGLIYFKKKNTGRI
LVPTS
NT seq 738 nt   +upstreamnt  +downstreamnt
atgcccgttcacagcttcttttctttgctctttctgctccttttatgttcaagagctgat
gctttctttggtcatgctgtgatacggtgtcagtttaattccctcgatgacatcgtttat
ttggcgcagtaccacttcaacaagatgcttatgctccaattcaacagcactttgggaaac
tataccggctacacaaagagatcaaaagaagttgcagataccctcaacaatatcccgact
ttcataaaacgtgaagaaaagaatctgaagacatgccaatcccacgcctcaatggtattt
gacctcctttcaaacccagtggagccctccgtcaggctgaagtcagctgatgcagcaggc
agcaaacatcagcgcatgctgatctgcagtgtgcacggattttatccaaaacacatcaga
gtcacttggcagaagaatggaaataatgtgacatctgatgtgacgtccactgatgaactg
tccaatgggaattggctctaccagattcactcatatcttgaatttacacccaaaactgga
gagaaaatcacgtgtatggtggagcatgccagcctcacagagcccaagctttatgagtgg
gacccaacagttgagtcacagaggaacaagtttgctgtcgggacagcagggctgctgctg
ggtctggtgtttttagttactgggctgatttacttcaagaagaaaaatactggccgaata
ttggtgccaacaagttga

DBGET integrated database retrieval system