Pseudoliparis swirei (Mariana hadal snailfish): 130213111
Help
Entry
130213111 CDS
T09868
Symbol
znf407
Name
(RefSeq) zinc finger protein 407
KO
K26729
Zinc finger protein 407
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130213111 (znf407)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
130213111 (znf407)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_ZNF462
zf-C2H2_16
Plasmodium_HRP
Zf-C2H2_ZNF451_C
zf-C2H2_2
zf-C2H2_REST
zf-met
zf-Di19
zf-C2H2_15
zf-BED
zf-C2H2_7th_ZNF462
Motif
Other DBs
NCBI-GeneID:
130213111
NCBI-ProteinID:
XP_056300524
LinkDB
All DBs
Position
22:complement(21664711..21809110)
Genome browser
AA seq
1558 aa
AA seq
DB search
MDVALISGKEPAEENGSDHDAAVKVLPGDVEMEETKSGSPRGTARPKETDEGAAERLRPV
SAPGDGENICAVCGFSAKCPRSLKIHFTRMHGKNSKNNRTAKPAEENENASDEIQQEVEM
ETESAGKMECNQGRDGDELRAAGGVDTSGTTGKETLPDTQQADREEAVPTQERRVSKRTP
KPKMIHSCNYCGQEFRDKSPLDVHMQRYHTKDTPYTFEAGENTSGAKEAEDPGSAAKAPP
IRVAAKRPFSRFQLKCYNCDFRVSTPALLENHTRDIHPGQAWYRCKLCDVLAATPEWMEA
HLSSDGHARRQEGDPGGDSASFDACVESVDGDSVGDAGLVDEPAGGESAAAASTAPTTAA
PTKGNRETRAAPVDEEDSEPETPRRKRGRPKQGSTTTCGYCGLVVSNATNLSVHVRRKHS
KEYGYSCTLCNYSCVTKGDMDRHCITKKHVRRAQESAGENRDAGVPAAAGEAQEADAARQ
SADKEAESDDSVAAANERGGDDEEETRSDGGQKKSKYDPVSACGFCDFVAQSIPSLHLHV
KRKHTKDFEYVCLACSYYAVTSREMSRHAVTEKHKLKSQSYLEPPGGEERGELAEADSCS
EDGHAAESQNADATTEPAEDNEDNEDNEDAEDAEDAEDAEVAEDAELVKVAEDAELVKDA
EDAELVKVAEDAELVKDAEDAELVKDAEDAELVEDAEDAMNVEPAEDAELVKDAEDAELV
KDAEDAMNVEPADDAEDAEDAMNVEPAEDAEDAVAAVASSADEKQVESLSSSSSREPVGL
VELCEEAPAELLPAVDQCAQQESPEEEGKPADEEPPSADEELSSDVGHPNAQMSRAPPFD
ACIVSVKDLAEQERRQRGGPAPEGEAAVVCLTGGVPTPSDSSHVRKIRRKAPKARREAKR
SNARIRCEDCGFVADGVSGLNVHISMKHPSKEKHFHCLVCGKSFYTESNLHQHLTSAAHL
RNERNSVETLPEGGAGFKCVKCTDRFASEQDLFVHIKEKHEELLREVNKYVLEDTEQINR
EREDNQGSVCKHCGKVCKSSNSMAFLAHIRTHTGSKPFMCKICNFATAQLGDARNHVKRH
LGMREYKCDICGWAFVMKKHLSTHMLGKHGVGQHKERKFECELCDRSFSEKWALNNHMKL
HSGEKPFKCVWPSCHYAFLNLSAMKDHYRTHTGEKSYLCDLCGFAGGTRHALTKHRRQHT
GERPFKCKICNFASTTQSHLSRHKRVHTGEKPYRCPWCDYRSNCAENIRKHILHTGKHEG
VKMYNCPKCSSATNSPMEFRNHLKACHPDIENPDLAYLHAGIVSKSFECRLKGQGAAFVE
MEAAEAAADEPLQQVIIIQGYSDGEVTIDHALEESAAATLQTLAMAGQVAEVLHITEDGQ
LIASGGEAAAGGGTQYVVLESGDAGKELRAMARAGARGHVISESSTALDALLSAVSEMGH
HEERRGGGEGLSPEIAEAVRSVVQADPRRDDDHEMQAGAGMQEVLQLAASQMMKEGLTQV
IVNNEGTHYIVTELDNCTLQVEGGVYGEEGEGQQAEPQAGEEMVVYLDGTPHNIVLEG
NT seq
4677 nt
NT seq
+upstream
nt +downstream
nt
atggatgtagcgttgatatcgggaaaagagcccgctgaggagaacggttctgatcatgac
gccgctgtgaaggtgctgccaggtgatgtggagatggaggaaacgaaaagtggctcgccc
cgtgggaccgccaggcctaaagaaacggacgagggcgccgccgagaggctgcggccggtc
tctgcgccaggagacggggaaaacatctgcgcggtctgcggcttctcggccaaatgtccg
agatccctgaagatccacttcacgcgaatgcacgggaagaactcgaagaacaacaggacc
gcgaagccggccgaagaaaatgaaaacgcgtcggacgaaatccaacaggaagtggaaatg
gagacggagagcgccggcaaaatggagtgcaaccaggggcgtgacggcgacgagctgaga
gcggcgggcggcgtcgacacgagcggtacgactggaaaggaaacgttaccagacacacag
caggccgatcgagaggaggcggtccccacacaggagaggagggtgagcaagagaaccccg
aagccgaagatgatccactcctgcaactactgcggacaagagttccgggacaagtcccct
ctggacgtgcacatgcagagataccacaccaaagacaccccgtacacattcgaggccggc
gagaacacgagcggagccaaggaggcggaagatcccggcagcgccgcgaaggccccgccc
atccgcgtggcggcgaagcgtccgttcagcaggttccagctgaagtgctacaactgcgac
ttcagggtcagcacgccggcgctgctggagaaccacacgcgggacatccacccgggccag
gcgtggtaccgctgcaagctgtgcgacgtcctggcggccacgccggagtggatggaggct
cacctgtcctcggacggccacgcgcggcggcaggaaggggacccgggcggcgactccgcc
tccttcgacgcctgcgtcgagagcgtcgacggggactccgtgggagacgccggcctcgtc
gatgaaccggccggcggagagtcggcggcggcggcttcgacggctccgacgacggcggct
ccgacgaaggggaatcgggaaacgagggcggctcccgtcgacgaggaggattcggagccg
gaaaccccgaggaggaagcgaggccggccgaagcaaggctccacgaccacctgcggctac
tgcggcctggtggtgtccaacgccaccaacctcagcgtccacgtccgccgcaagcacagc
aaggagtacggctacagctgcacgctgtgcaactacagctgcgtgaccaaaggggacatg
gaccgccactgcatcaccaagaaacacgtgcggcgcgcgcaagagagcgccggcgagaac
cgagacgccggcgtccccgcggcggccggggaagcgcaggaagccgacgcggcgcggcag
agcgccgacaaagaggcggagtccgacgactcggtggcggcggcaaacgagcgcggcggc
gacgacgaggaggaaacgcggtccgacggcggccagaagaaaagcaaatacgaccccgtc
agcgcgtgcggcttctgcgacttcgtggcccagtcgatcccgtcgctccacctgcacgtc
aagaggaagcacaccaaagactttgagtacgtctgcctggcgtgtagctactacgccgtg
acgagccgcgagatgtctcgccacgccgtcaccgaaaagcacaaactgaagagccagagc
tacctggagccgcccggcggcgaggagcggggagagctcgcggaggccgactcgtgttct
gaggacggccacgccgccgagagtcagaatgcagacgcgaccacagagcctgccgaggac
aatgaggacaatgaggacaatgaggacgctgaggatgctgaggatgctgaggatgctgag
gttgctgaggatgctgagctcgttaaggttgctgaggatgctgagctcgttaaggatgct
gaggatgctgagctcgttaaggttgctgaggatgctgagctcgttaaggatgctgaggat
gctgagctcgttaaggatgctgaggatgctgagctcgttgaggatgctgaggatgctatg
aatgttgaacctgctgaggatgctgagctcgttaaggatgctgaggatgctgagctcgtt
aaggatgctgaggatgctatgaatgttgaacctgctgatgatgctgaggatgctgaggat
gctatgaatgttgaacctgctgaggatgctgaggatgctgttgccgcggtagctagcagt
gcagacgagaagcaagtagagagtctgtcgtcctccagtagcagggagccggttggactc
gtggagctgtgtgaagaagccccagcagaacttcttcctgcggtggatcagtgcgcacag
caggagagccctgaggaagaggggaagccagcggacgaagaacccccgagcgcggacgag
gaactctcgagcgacgtcggccacccgaacgcacagatgtcccgagcgccgcccttcgac
gcctgcatcgtgtccgtgaaggacctcgccgagcaggagcggcggcagcggggcggcccg
gccccggagggcgaggcggccgtcgtctgcctgacgggcggcgtcccgacgccctccgac
tcgagccacgtgcgcaagatccggcgcaaggcgccgaaggcgaggcgggaggccaagcgg
agcaacgcccgcatccgctgcgaggactgcggcttcgtggcggacggcgtcagcggcctc
aacgtgcacatctccatgaagcacccgtccaaggagaagcacttccactgcctggtgtgc
ggcaagtcgttctacacggagagcaacctgcaccagcacctgacgagcgccgcgcacctg
cgcaacgagcgcaacagcgtggagacgctgccggagggcggcgccggcttcaagtgcgtc
aagtgcaccgaccgcttcgcctcggagcaggacctgttcgtgcacatcaaggagaagcac
gaggagctcctgagggaggtcaacaagtacgtgctggaggacacggagcagatcaaccgc
gagcgcgaggacaaccagggcagcgtgtgcaagcactgcggcaaggtgtgcaagagcagc
aactccatggccttcctggcgcacatccgcacgcacacaggatccaagcccttcatgtgc
aagatctgcaactttgcgacggctcagctgggcgacgccaggaaccacgtgaagaggcac
ctcggcatgagggagtacaagtgcgacatctgtgggtgggccttcgtgatgaagaaacac
ctcagcacccacatgctgggcaaacacggagtcggacagcacaaagagaggaagtttgaa
tgcgagctgtgcgaccgctccttcagcgagaagtgggccctgaacaaccacatgaagctg
cacagcggggagaaacccttcaagtgcgtgtggccatcgtgccactacgccttcctcaac
ctgtcggccatgaaggaccactaccgcacgcacacaggagagaagtcttatctatgtgac
ctgtgtggttttgccggcggcacgagacacgccctcaccaaacaccgacgccaacacaca
ggagagaggcccttcaagtgtaagatctgcaacttcgcctccaccactcagtcccatctg
tcgcggcacaagcgcgttcacacgggggagaaaccctaccgctgcccctggtgcgactac
aggtctaactgtgcagagaacatccgtaagcacatcctccacacgggtaaacatgaaggc
gtgaagatgtataactgtcctaagtgctcctcggccaccaactcgcccatggagttccgg
aaccacctgaaggcgtgtcaccccgacatcgagaaccccgacctcgcctacctgcacgca
ggcatcgtgtccaagtccttcgagtgccgtctgaagggtcagggcgccgccttcgtggag
atggaggcggcggaggcggcggccgacgagccgctgcagcaggtcatcatcatccagggc
tacagcgacggcgaggtcaccatcgaccacgccctggaggagtcggccgccgccaccttg
cagacgctcgccatggcgggccaggtggcggaggtgctccacatcacggaggacggccag
ctcatcgcctcgggcggcgaggcggcggccggcggcggcacgcagtacgtggtgctggag
tcgggcgacgccgggaaggagctccgggccatggcgagggccggcgcccgcggccacgtg
atctcggagtcgtccacggcgctggacgctctgctcagcgccgtcagcgagatggggcat
cacgaggagaggcggggggggggcgagggcctgagccccgagatcgccgaggcggtgcgc
agcgtggtgcaggcggacccgaggcgggacgacgaccacgagatgcaggcgggcgccggg
atgcaggaggtgctgcagctcgccgcctcccagatgatgaaggaggggctcacccaggtc
atcgtcaacaacgaagggacgcactacatcgtcacggagctggacaactgcaccctgcag
gtggaggggggcgtgtacggggaggagggggaggggcagcaggcggagcctcaggcgggg
gaggagatggtggtgtatctggacggaacgccgcataatatagttctggaagggtag
DBGET
integrated database retrieval system
