Pseudomonas sp. W03: SD196_05965
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Entry
SD196_05965 CDS
T11012
Name
(GenBank) malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
pswo Pseudomonas sp. W03
Pathway
pswo00020
Citrate cycle (TCA cycle)
pswo00270
Cysteine and methionine metabolism
pswo00620
Pyruvate metabolism
pswo00630
Glyoxylate and dicarboxylate metabolism
pswo00680
Methane metabolism
pswo00710
Carbon fixation by Calvin cycle
pswo00720
Other carbon fixation pathways
pswo01100
Metabolic pathways
pswo01110
Biosynthesis of secondary metabolites
pswo01120
Microbial metabolism in diverse environments
pswo01200
Carbon metabolism
Module
pswo_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pswo_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pswo_M00012
Glyoxylate cycle
pswo_M00168
CAM (Crassulacean acid metabolism), dark
pswo_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
pswo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SD196_05965
00620 Pyruvate metabolism
SD196_05965
00630 Glyoxylate and dicarboxylate metabolism
SD196_05965
00566 Sulfoquinovose metabolism
SD196_05965
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
SD196_05965
00720 Other carbon fixation pathways
SD196_05965
00680 Methane metabolism
SD196_05965
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
SD196_05965
Enzymes [BR:
pswo01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 (S)-malate dehydrogenase (NAD+, oxaloacetate-forming)
SD196_05965
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Gene cluster
GFIT
Motif
Pfam:
Ldh_1_N
Ldh_1_C
Sacchrp_dh_NADP
UDPG_MGDP_dh_N
NAD_binding_8
Auxin_BP
Motif
Other DBs
NCBI-ProteinID:
XOT23752
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Position
complement(1269192..1270121)
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AA seq
309 aa
AA seq
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MNKLSIVGAGMVGEAAAQIIAREEFCRELTLIDVQGELAQGKALDVWQAAVESGSDTRVH
GGSNAELLQDSELVVITAGVPRKPGQSRQDVLSINLPILDSIMLDIKRHAPAATVLVVSN
PVDVLTYRAWSLSGLGRDRVFGQAGVLDTARMKCFIAEETGFSARDITALVLGGHGDSMV
PLMRYCAVGSVPLSHFLSDEQIERIVERTRKGGGEILGLKKLGSACDAPGVAIAQMVDAI
ANGRNSILPTVAILEGEYGRTGIAMGVPCVLSEKGLVRVIELSLDAQEQAMFDHSADQVV
RDIAEMNAL
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagctatccattgtaggtgccggtatggtgggcgaggcggcggctcagatcatt
gcccgggaagagttctgccgtgaattgacgttgattgatgtgcagggtgagttggcacag
ggcaaggcgctggacgtctggcaggcggcagtcgagtcgggttccgatacccgggttcat
ggcgggtccaatgccgaattgctgcaggactccgagctggtggtgatcacggcgggtgtg
ccacgcaagcctggtcagtcgcgtcaggatgtcttgagcatcaatctgccgattctcgac
agcatcatgctggacatcaagcgtcacgctccggcggcgacggtgctggtggtatcgaac
ccggtcgatgtgctgacctatcgggcctggagtctcagtgggctgggacgcgacagggta
ttcgggcaggcaggggtgctggataccgcgcgcatgaagtgtttcattgccgaggagacc
gggttttctgctcgggatatcacggcgctggtgctgggcgggcatggcgacagcatggtg
ccgctgatgcgctactgtgcggtcggttcggtgccgctgtcccacttcctgtccgatgag
cagatcgagcggattgtagagcgcacacgcaagggtggcggcgagattctgggattgaag
aaactggggagcgcctgcgatgcgccgggcgtggccattgcacagatggtggatgccatc
gccaatgggcgaaacagcattttgccgacggtcgcgattctcgagggcgagtacgggcga
acaggcatcgccatgggcgtcccctgtgtgctgtcagagaagggactggtgcgagtgatc
gagctgtctctggatgcgcaggagcaggcgatgttcgaccactctgcagaccaggtggtg
cgtgatattgcagaaatgaatgccttgtaa
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