Pseudochrobactrum sp. XF203: LDL70_01005
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Entry
LDL70_01005 CDS
T10521
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
psxf Pseudochrobactrum sp. XF203
Pathway
psxf01501
beta-Lactam resistance
psxf01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
psxf00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LDL70_01005
01503 Cationic antimicrobial peptide (CAMP) resistance
LDL70_01005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psxf03036
]
LDL70_01005
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psxf02000
]
LDL70_01005
01504 Antimicrobial resistance genes [BR:
psxf01504
]
LDL70_01005
Chromosome and associated proteins [BR:
psxf03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
LDL70_01005
Transporters [BR:
psxf02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LDL70_01005
Antimicrobial resistance genes [BR:
psxf01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LDL70_01005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
Diguanyl_cycl_sensor
fvmX3
Motif
Other DBs
NCBI-ProteinID:
UCA45878
LinkDB
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Position
242858..243997
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AA seq
379 aa
AA seq
DB search
MKNWKQITVCLVVAAAAFGGWSWYNTERSATQATGGAPAAGQSGARNAPLVVVKPAQKQV
VNDKLSAIGSGVALNTVAVSPYSSGTIRRFLVSAGTTVQKDQVIAELDAETEQIAVEKAQ
VLLKDAEITQQRMATLRASNTATQVQVVAAELALANAKLAVKDAELALSRRSVTAPIAGI
VGILPVDAGNYVTSSTTIATIDDRSKLLIDIWVPERFAPQLRLGQAVTAMPTALPGKSFQ
GQVSAMDNMIDAASRTLRVRAEITNPSDVLRAGMSFTVTILFPGDQYLAVDPLSVQWDGD
GSYVWRITKDGKAERVAARIIQRNANAVLVDGALAEGDTIVTEGVQNVREGGNVTIKGAG
NTASPKEPATAQANSKQAG
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaactggaaacaaatcacggtttgtttggtcgtggctgccgccgccttcgggggc
tggagctggtataatactgaacgttccgcgacacaggccaccggcggcgcaccggcagca
gggcagagtggcgcgcgcaacgcgcctttagtggttgtaaagccagcccagaaacaggtc
gtcaatgacaagctgagtgctatcggcagcggtgttgcgctcaatacggttgcggtttcg
ccttattcaagcggaactatacgccggtttctggtgagtgcaggcaccaccgtccaaaaa
gatcaggtcattgccgaactggatgcggaaacagaacagattgccgttgagaaagcacag
gtactgctgaaagacgcggaaattacacaacagcgtatggcaactttgcgggcatcgaat
acggcaacgcaggtacaggttgttgcggcagagcttgctctggccaatgcaaaactggct
gtgaaggatgcggaactggcgctcagccgccgttcggtgacagcaccgattgccggtatt
gtcggtattctgccggtggacgcagggaattatgtaacatcctccaccaccatcgccacg
attgatgaccgctcaaagctgctgattgatatctgggtaccggaacggtttgcaccgcaa
ttgcggttggggcaggccgtgacagcaatgccgacggctctgccaggcaaaagctttcag
gggcaggtcagcgctatggataatatgattgacgcggccagccggactttgcgggtgcgt
gcggaaattaccaatccgagcgatgtgctgcgtgccggtatgtcttttaccgtgactatc
cttttccccggcgatcaatatctggcggttgacccgctgtctgtgcagtgggacggcgat
ggttcttatgtctggcgcattaccaaagatggcaaagccgagcgtgttgctgcacggatt
atccagcgcaatgccaatgcagtgctggttgatggtgcactggctgaaggcgatacgatc
gtcaccgaaggcgtgcagaatgtgcgtgaaggcggcaatgtgacgattaagggcgcgggc
aacaccgccagcccgaaagaaccggccacagcgcaggcaaacagtaaacaggcaggatga
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