KEGG   Psychroflexus sp. ALD_RP9: IMZ30_03960
Entry
IMZ30_03960       CDS       T09874                                 
Name
(GenBank) efflux RND transporter permease subunit
  KO
K18138  multidrug efflux pump
Organism
psyd  Psychroflexus sp. ALD_RP9
Pathway
psyd01501  beta-Lactam resistance
psyd01503  Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:psyd00001]
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    IMZ30_03960
   01503 Cationic antimicrobial peptide (CAMP) resistance
    IMZ30_03960
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:psyd02000]
    IMZ30_03960
   01504 Antimicrobial resistance genes [BR:psyd01504]
    IMZ30_03960
Transporters [BR:psyd02000]
 Other transporters
  Electrochemical potential-driven transporters [TC:2]
   IMZ30_03960
Antimicrobial resistance genes [BR:psyd01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump MexAB-OprM [MD:M00718]
    IMZ30_03960
SSDB
Motif
Pfam: ACR_tran SecD_SecF_C
Other DBs
NCBI-ProteinID: QSS97875
LinkDB
Position
831562..834768
AA seq 1068 aa
MKEGIAGKIAKGFIDSKLTVLLMIVFMIIGVYSSFLIPREEEPQIDVPMADIFVGYPGAN
PTEVESRITKPLEKIISNVTGVKYVHSSSMAGQSMMIVQFYVGEDIERSYVKLYNEIMKH
FNEMPQGVTPPLIKTRSIDDVPVLGLTFWSETYNDYELKKIAQQAKQEFKTITNVSYADI
IGGRDEVLNVELQPSQMLATGVDALSIVQHIKAANHQLQLGAISQANTAFKLKTNGFFRS
AKEIENLMIGQHNGLPIYLHQVANITQGPEDAHQYTSFGFGAGDTDMKSNFQSEYPSITL
AISKRKGADAMKIADQVLEKVETLKQTTIPNEVKVEVTRNYGETASQKVSELLLHLIGAI
IAVTIVVMLAMGWRGGLVVFLSVPITFALTLLSYYLLDYTLNRITLFALVFVTGIVVDDS
IIIAENMHRHFKMKRLPFKQAALYAINEVGNPTILATFTVIASVLPMAFVSGLMGPYMSP
MPIGASIAMILSLFVALTITPYLGYLFLRVKSNEVETTSENESETTGIESTKIYKLYNAI
ERPLLENKKKSALAILVTAIILFASIGLFFTKSVLVKMLPFDNKNEFQVIVDLPEGSTLE
ETAKAVKDISQYIAQQDQVVNYQSYIGAASPITFNGLVRHYDLRQGENMADIQINIKNKD
NRDLQSHDIAKLMRPGIQEVAKKHNANVKIVEVPPGPPVLSTIVAEVYGPTQEKRIEIAK
QIKQILLETQDVVDVDWRVEAPQIEYTYNINKDKASKSGIATQQIVQTLGLVVGEQAISA
IYDPDATEQILVKLSVEDADRNLQDINQLHITSQTGAMIPIESLVTLEEGEIEKSRYRKN
QQGLVYVTAEMAGEFESPVYAILGMSEKLKDINLPAGYELSELYLGQPENTDDFTVKWDG
EWQITLEVFRDLGLAFGGVIIIIYMLIVGWFQNFKTPIVMMVAIPLSMIGIIIGHWIMGA
FFTATSFIGMIALAGIMVRNSVLLIDFVDIRLNEGIPLKQAVIEAGAVRTTPILLTAGTV
VIGAFVILFDPIFQGLAISLMGGTIGSTFLTLLIVPLVYYLIMKNKVK
NT seq 3207 nt   +upstreamnt  +downstreamnt
atgaaagaaggaattgcaggcaaaattgccaaaggatttatagattcaaaactaactgtc
ttactcatgattgtttttatgatcatcggggtttacagttcgtttttaattccgcgtgaa
gaagagccacaaatagacgtgccaatggccgatatttttgtaggttatcctggagcaaac
ccaactgaagtagaatcgcgcatcaccaaaccacttgaaaaaattatttctaatgttaca
ggtgtaaaatacgtgcattcctcttctatggctgggcaaagtatgatgattgttcaattt
tatgtaggcgaagatattgagcgctcttacgtaaaattgtataatgaaattatgaagcat
tttaacgaaatgcctcaaggcgtcacaccgccattaattaaaacacgctccatcgacgat
gttcccgtattaggattaaccttttggagtgaaacttataatgactacgagcttaaaaaa
attgcacaacaggccaaacaagagtttaaaaccattaccaatgtgtcttatgccgatatt
attggtggccgtgatgaagttctaaatgttgagcttcagccatcacaaatgctagctact
ggtgtcgatgctttaagcatagttcaacatattaaagcagcaaatcatcaacttcaactg
ggtgcaattagccaagccaatacggcttttaaattaaagactaatggcttcttccgtagc
gctaaagagatcgaaaacctaatgattggacagcataacgggctgcctatttatttacat
caagttgcaaatataactcaaggtccagaagatgcgcaccaatacacaagctttggtttt
ggcgcaggagatacagatatgaaatctaattttcaatctgaatatccttcaataacctta
gctatttcaaaacgaaaaggagcagatgcaatgaaaattgctgaccaagttttagaaaag
gttgaaaccctaaaacagacgacaattccaaatgaagtaaaagttgaagtaactagaaat
tatggtgaaaccgcttctcaaaaagtgtccgaattactattgcatttaataggagccatt
atagccgttactattgtagtaatgttagctatgggttggcgtggcggattagtggtcttt
ttatcagtgcccatcacatttgcattaacactattgagttactatttattagattataca
ctaaatagaattacgctttttgcattagtttttgttacaggaattgttgtagacgactct
attatcatcgccgaaaatatgcaccggcattttaaaatgaaacgtttaccatttaaacaa
gcagcactttatgccattaatgaagttggcaacccaactattttagcaacctttaccgtc
attgcttcggtattgccaatggcttttgtaagcggtttaatgggaccttacatgagccca
atgcctataggtgcttcaattgcaatgattttatctctttttgttgcattaaccattacg
ccataccttgggtatttatttttacgggttaaatcaaatgaagttgaaacaacatcagaa
aacgaatctgaaacaacaggaattgaatcgactaagatttacaaactttataatgctatt
gaacggccgctacttgaaaacaagaaaaaatcagctttagcgattctagttactgccatc
atcctttttgcttcaatcggcttatttttcacaaaaagtgtattagtaaaaatgctaccg
tttgataataaaaacgagtttcaagtaattgttgatttacccgaaggcagcactttagaa
gaaacagccaaagccgttaaagatatttcgcaatacatcgctcagcaagatcaagtcgta
aattatcaaagttatattggtgccgcctcgcctattacatttaatggtttagtaaggcat
tacgatttaagacaaggcgaaaacatggccgatattcaaataaatattaaaaacaaagac
aaccgagacctgcaaagtcatgatattgccaagcttatgcgacctggtattcaagaggtg
gcaaaaaaacataatgctaacgtaaaaattgttgaagtgccaccaggaccaccagtttta
tcaacaattgtagctgaagtttacgggccaacacaagaaaaacgtattgaaattgccaag
caaataaagcagattttacttgaaacacaagatgttgttgatgttgattggcgggttgaa
gctccacaaattgaatacacttataatattaataaagataaagcctcaaaatcaggtatt
gctactcaacaaattgttcagactttaggtctagttgttggcgaacaagccatcagtgcc
atttatgatccagatgcaacagaacagattttagtaaagctaagtgttgaagatgctgat
agaaacctacaagacattaaccaactacatattacatcacaaacgggcgctatgattcct
attgaatctttagttactttagaagaaggtgaaattgaaaaaagtcgttatcgtaaaaac
caacaaggcttggtatatgtaacagcagaaatggctggagaatttgaaagtccagtttac
gccattttaggaatgtccgaaaagcttaaggacatcaatttacctgcaggttacgaatta
agtgaactttaccttgggcaacctgagaataccgatgattttactgtaaaatgggatgga
gaatggcaaatcacgcttgaggtctttagagacttaggcttagcttttggtggtgtaatt
attattatttatatgctaattgtaggctggttccaaaactttaaaacacctatcgtcatg
atggtggccataccgttatctatgataggtattattattggtcattggatcatgggtgct
tttttcacagcaacttcatttatcggaatgattgccctagcaggaataatggtacgtaac
tcagtgctattaatcgattttgtagacatccgattaaacgaaggcatcccactaaaacaa
gcggtaatagaagcaggtgcagttagaacaacaccaattttattaacggctggaacagtt
gtcataggcgcatttgtaatcttattcgatccaatatttcaaggtctagccatttcactt
atgggcggcacgattgggtctacattcttaaccttacttatcgtaccattagtctattat
ttaataatgaaaaacaaagtaaaataa

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