Desulfovibrio mangrovi: N1030_08225
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Entry
N1030_08225 CDS
T08614
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
psyf
Desulfovibrio mangrovi
Pathway
psyf01501
beta-Lactam resistance
psyf01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
psyf00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
N1030_08225
01503 Cationic antimicrobial peptide (CAMP) resistance
N1030_08225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psyf03036
]
N1030_08225
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psyf02000
]
N1030_08225
01504 Antimicrobial resistance genes [BR:
psyf01504
]
N1030_08225
Chromosome and associated proteins [BR:
psyf03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
N1030_08225
Transporters [BR:
psyf02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
N1030_08225
Antimicrobial resistance genes [BR:
psyf01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
N1030_08225
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSH_RND
RND-MFP_C
Beta-barrel_RND
HH_MFP_RND
YknX_C
HH_EMRA
HH_YBHG
BSH_CzcB
CzcB_C
Beta-barrel_RND_2
BSH_CusB
Pilus_CpaD
BSH_YhbJ
TP096X_C
HH_CzcB
VWA_3_C
Motif
Other DBs
NCBI-ProteinID:
UZP68943
LinkDB
All DBs
Position
complement(1782546..1783772)
Genome browser
AA seq
408 aa
AA seq
DB search
MNVISQAFRMMCVAAVLFVLAGCSEDKDAAQAAHGMPPAPVQAVVMERMDVPIDYEYVGQ
TEGARSVEVRARVQGLLLKRTYREGSYVREGDVLFLLDPEKYRATSAQAGGELASLRAKL
EQARLEYKRVADLYARGVVSAKERDDALAAYDSGKAEVAAAEAKLQADQLNLGYTQVRAP
ISGITSQETRSEGSLITTDSAGSLLTTITQLDPLYVNFAIPGTESMLLRRMVNEGRVVIP
ANGYNVRLKLADGSVYEETGKMTFEDRYVDPQTGSIRARAEIVNPDALVLPGEFVRVRLE
GAYYKDALVIPERAVLFSQKGPMVYVLDDKNVATIRPVKLGQTLEKGIVVEGGLEAGERI
VVDGIMKVRPGGAVMVLGADGKPVAQNAAPAAVAESGNAAHAEEGRAN
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgatttcgcaagcgttccggatgatgtgcgttgccgccgtgctgtttgtcctt
gccgggtgcagtgaggataaggacgccgcgcaggctgcccatggtatgccgcccgcaccg
gtgcaggctgtggtcatggagcgcatggatgttccgattgattatgaatacgtcgggcag
acggaaggcgcccgttccgtagaggttcgcgcccgcgtgcaggggttgctgctcaagcgt
acctatcgcgaaggttcctatgtgcgcgagggggatgtcctttttttgctggaccccgaa
aagtatcgtgccacctcggctcaggctggcggcgagcttgccagtctgcgcgccaagctt
gaacaggctcgtcttgaatacaagcgtgtggctgacctgtacgcccgtggtgttgtcagc
gccaaggaacgcgacgatgcgcttgccgcgtacgactccggaaaggcggaagttgctgca
gccgaagcaaagctgcaggcggatcagctgaatctggggtatacgcaggtgcgcgccccc
atctccggcatcaccagccaggagacccgttcggaaggcagcctgattaccaccgactcg
gctggcagcctgctgaccaccattacccagcttgatcccctctatgtgaatttcgccatt
cccggcacggagtccatgctcctgcgccgtatggtgaacgagggcagggtggtcattccc
gcgaatggctataacgttcggctgaagctggccgacggcagcgtgtatgaagagaccggc
aagatgaccttcgaggatcgttacgtggacccccagacgggttccatccgcgcccgtgcc
gagatcgtgaatcccgacgcccttgttctgccgggcgaattcgtgcgcgtgcgtcttgaa
ggcgcttactacaaggatgctcttgtcattcccgagcgtgcggttctgttcagccagaaa
ggccccatggtctatgtactggacgacaagaacgtggcgaccatccgtcctgtgaagctt
gggcagacccttgagaagggcattgttgtggaaggcggccttgaggccggagaacgtatt
gttgtagatggcatcatgaaggtgcgccccggcggagccgttatggtgctgggggccgac
ggtaagcccgtggcacagaatgcggctcccgctgccgttgccgaatccggcaatgccgct
catgcagaagaggggagagccaactga
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