Psychrobacter sp. KFRI-CH2-11: AADH33_03050
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Entry
AADH33_03050 CDS
T11272
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
psyk Psychrobacter sp. KFRI-CH2-11
Brite
KEGG Orthology (KO) [BR:
psyk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psyk03032
]
AADH33_03050 (topA)
03400 DNA repair and recombination proteins [BR:
psyk03400
]
AADH33_03050 (topA)
Enzymes [BR:
psyk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AADH33_03050 (topA)
DNA replication proteins [BR:
psyk03032
]
Prokaryotic type
DNA Topoisomerases
AADH33_03050 (topA)
DNA repair and recombination proteins [BR:
psyk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AADH33_03050 (topA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WZH80463
UniProt:
A0AAU6S211
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Position
716725..719394
Genome browser
AA seq
889 aa
AA seq
DB search
MAKTTTKKTPASATDSPKKGKSLVIVESPAKAKTINKYLGDDFIVRSSIGHVRDLPVSAS
KSAKKTTAAKKDETLSKEEKAQQALVRRMGVDPEHDWAAVYEVLPNKTKVIKELKALAKD
ADKIYLATDMDREGEAIAWHLKEVIGGPDSKYQRVVFNEITKSAIQNAFKEPSKLDIDRV
NAQQARRFLDRVVGFMVSPLLWQKIARGLSAGRVQSVAMRLVVEREHEIRAFIPEEYWQI
HADTHVTASNVKKPTDAEQSSIRLEATKQGGKTLKLVNKEQTDKVLAVLKTSDFIVKERE
EKPTQSRPSAPFITSTLQQAASTRLGFSVKKTMILAQRLYEAGHITYMRTDSTFLSGDAL
AAVRGYIEDSYGDKYVPEKPNFYGNKQGAQEAHEAIRPSNVHMKSTQLKGVERDAIRLYE
LIWRQFVACQMLPAKYLSVNLFVAASDVELKARGRTMVFDGYTKVMPPAKTDDTLLPDVK
KGDQLTLDKLDPSQHFTKPPPRYTEASLVKELEKKGIGRPSTYASIISTIQDRGYVKLEN
KRLFAEKMGDIVTDRLTASFPDLMDYTFTAALEDKLDHVAEGDQDWKDVLDNFYGDFKKT
LERAKEKDGMRPNDPTDVPDVHCDICSRPMQLRTGSTGVFLGCTGYNLPPKERCKGTKNL
MPVEAFANLDESDAADEVAEVKDLMEKKRCPKCGTAMNGYIVDGGLKLHICGNNPDCDGY
ILEEGKFEVPGSDAPTIDCDKCDGQMELKTGRFGPYFACQQCDNTRKVLKTGEAAPPRMD
PIHLPELKSTKHDDYFILREGAAGMFLAASKFPKVRETRAPKLAELRPIKDKMEDKFQYL
FDGPDEDPDGNPTILRWSRKKKEQYIGSEKNGKATRWGVYWRNGEWVEE
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaccacaaccaaaaaaactccagcatccgcgaccgatagcccaaaaaaaggc
aagtcgttggtgattgtcgaatcacccgccaaagcaaaaaccattaataaataccttggt
gatgactttatcgtacgctcaagtatcggtcatgttcgtgatttgcccgttagtgccagt
aaaagtgcaaaaaagacaaccgctgctaaaaaagatgagacgctgagcaaagaagaaaaa
gcgcagcaagcactggtgcgccgtatgggtgtcgatccagagcatgactgggcggccgtc
tatgaagtgctgccgaacaaaaccaaagtcatcaaagagctaaaggcactggccaaagac
gctgacaaaatttatctggccacggatatggatagagaaggggaagccatcgcttggcat
ctaaaagaagtcatcggcggccctgatagcaaataccagcgtgtggtttttaatgagatt
accaaatccgccattcaaaatgcgtttaaagagccatcaaagctcgatatcgaccgtgtc
aacgcccagcaagcgcggcgctttttagaccgtgtcgtcggctttatggtatcgccgctg
ctatggcaaaaaatcgcacgtggtctgtcggcgggccgtgtgcagtcggttgcgatgcgc
ttggtggtcgagcgtgagcatgagattcgcgcttttattccagaggaatactggcagatc
catgccgatacccacgttactgctagtaatgtcaaaaaaccgacagatgctgagcaaagc
tcgattcgcctagaggcgaccaaacaaggcggcaaaacgcttaagctggtcaataaagag
cagaccgataaagtcttagcagtactcaaaaccagcgattttatcgtcaaagagcgtgag
gaaaaacccacgcagtcgcgtccgagtgcgccgtttatcacctcgaccttgcaacaagcg
gccagcacacgcttagggttttcagtgaagaagaccatgattttagcgcagcgcctgtat
gaggcggggcacattacctatatgcgtaccgactcgacttttttgtctggtgatgccttg
gcggctgtgcgtggctatatcgaagacagctatggcgataaatatgtgccagaaaaacca
aatttttatggcaacaaacaaggcgcacaagaggcgcatgaggcgattcgcccatctaat
gtccatatgaaatccacccagctcaaaggcgttgagcgtgatgccatacgtctgtacgag
ctgatttggcgtcagttcgtcgcctgtcagatgctgccagcaaagtatctatcggtgaat
ttgtttgtggcggcaagcgatgtcgagctaaaagcccgcggccgtaccatggtgtttgat
ggctataccaaagtcatgccgcctgccaagacggacgatacgctactgcctgatgtcaaa
aaaggcgatcagttgaccctagataagctcgacccaagccagcactttaccaagccacca
ccgcgctatactgaggccagccttgtcaaagagctggagaaaaaaggcatcggccgtcca
tcgacatatgcctctatcatctccaccattcaagaccgcggctatgtcaagctcgaaaac
aagcgcttgtttgccgaaaaaatgggtgatatcgtcaccgatagattgaccgcaagcttc
ccagacttaatggactatacctttactgccgcgttagaggacaagctagatcacgtcgca
gaaggcgatcaagactggaaagatgtgctagataacttttatggcgactttaaaaagacg
ctcgagcgcgccaaagaaaaagacggcatgcgccccaatgacccgaccgatgtgccagac
gtgcactgcgatatatgctcgcgtccgatgcagctgcgtaccggctcgacgggggtgttt
ttaggttgtacaggttataacttaccgccaaaagagcgctgcaaaggcaccaaaaacttg
atgccagtcgaagcctttgccaatcttgatgaaagcgacgcggccgatgaagtggcggaa
gtcaaagacctgatggagaaaaaacgctgtcccaaatgtggtacagcgatgaacggctat
atcgtcgatggcggcctgaaactgcatatctgcggtaacaatcctgactgcgacggttat
atcttagaagaaggtaagtttgaggtcccaggctcagatgcgccaaccattgattgtgat
aagtgcgatggacaaatggagctaaagaccggacgctttggcccttattttgcctgtcag
cagtgcgacaacacccgtaaagtgctaaaaaccggtgaagctgcaccgccgcgtatggat
ccgatacatctgccagagctcaaatcaaccaagcatgatgactattttatcttgcgtgaa
ggcgctgcaggcatgttcctcgccgcctcaaagttcccaaaagtgcgcgaaacccgtgcg
cccaagctggctgaactgcgacctatcaaggataagatggaagataaattccagtatctg
tttgacgggccagatgaagatccagatggcaatccaacgatactgcgctggtcacgtaag
aaaaaagagcaatacatcggctctgaaaaaaacggcaaagccacgcgttggggtgtgtac
tggcgtaatggcgagtgggttgaggagtaa
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