Psychrobacter sp. KFRI-CH2-11: AADH33_04840
Help
Entry
AADH33_04840 CDS
T11272
Name
(GenBank) peptigoglycan-binding protein LysM
Organism
psyk Psychrobacter sp. KFRI-CH2-11
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
Motif
Other DBs
NCBI-ProteinID:
WZH80779
LinkDB
All DBs
Position
complement(1160929..1162797)
Genome browser
AA seq
622 aa
AA seq
DB search
MSCRLSHRLSHRLTRVHRAVSMALLCSVSYAAFVSSAQAATIGKTVVTSAQHEPLRASIS
VSDIRAADFSASLANPAIYQQMGLTPTDSMMVHFQPTSETSGQVYISTAEPVSKPFADIV
LTINDQGQRNVVPKTLLMPLDASLPIDTTKNIVTGAKKPSLPAVSANNAKPLTLRKGAPP
PLISASAARSSTSAATTVKRSAPNVQPPNTQGANTQSASIQTQAASASTPAKTSVSATDH
LAYTPSRLDNGRLANDFELTAASPAKSNAGRTNPASRLDNGRLAQEQTASSVSIVSEASP
ATQHTLGTAQADNALDTLNIQVTRQIQPSQQKNTDMSASIVAAASKNDAAQDNQTAEQTA
LSTAHTAAATVVGSNIPADTAAPSQPSTNNQTAPTNHVAADSIVDAQTQSTTSVQYQVQR
NDSLWIIAQQIAQENNVDIQTVMKQIQSQNPNAFINKNADQLKADAKLNLPNYDVLPSQQ
ALEAAISAQKQKYRRRINTPVAQPAPKAKPHTAKVQNNSAPAAKPQKKPTITKTLPRAQF
SVLAPGHNGNADGTQTKSAAATGNGLSTDILATLKASRQAAASQAQSLSKTSSALDSYTR
KIQLQNQKLAELQARLKKLRNQ
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgtcgtttatctcatcgtttatctcatcgtttgactcgcgtacaccgtgcggta
tcgatggcattactgtgttcggtaagctatgccgcctttgtctctagcgcccaagcggcc
acgattggcaagactgttgtgacctcagcacagcatgagcctctaagagccagcatcagt
gtctcggacattcgggcggctgacttttcagccagcttagccaaccccgctatctatcag
caaatgggattgacgccaactgattcaatgatggtacactttcagccgacctcagaaacc
agcggccaagtctatatcagtacagcagagcctgtttctaaaccctttgccgatattgta
ttaaccatcaatgatcaaggtcagcgtaatgtcgtgcccaaaacattattgatgccgctc
gatgccagcttacccatcgataccaccaaaaacatcgtaacaggcgcaaaaaagcccagt
ttacctgccgtatccgccaataatgccaagcccttgacccttagaaaaggcgctccgcca
ccactgatatcggcatcagccgcacgctcatcgacaagcgctgctactaccgtcaaacgg
tccgcgcccaatgtgcaaccaccgaatacgcaaggggccaatacgcaaagcgcaagtatt
caaacgcaagctgcttcagccagcacgcctgccaagacatctgtatcagcaactgaccat
ctagcctatacgcctagccgtttagacaatgggcgtttggctaatgactttgagctcacg
gccgccagtccagcgaagagcaatgctggccgaaccaaccctgccagccgcttggacaat
ggccgtttggctcaagagcagaccgcctcaagtgttagcatcgtgagcgaagcatcacct
gctacgcaacacacgctcggcacagcgcaagcagacaacgcgctagatacgctaaatatt
caagtcacgcgtcagatacagccgagtcagcaaaaaaacacggatatgagtgccagcatc
gtagctgccgcctcaaaaaacgatgcagctcaggataaccaaaccgccgagcaaacggct
ttgagcacggcacatacggcagcggcaacggttgtcggtagcaacataccggctgatact
gccgcgccctctcagccaagcaccaacaatcaaactgcacctacaaatcacgtggcggca
gactctatagtagacgcccaaacgcaaagcacgacaagcgttcaatatcaagtacagcgc
aatgatagcttatggatcattgctcaacagattgcccaagaaaacaatgtcgatattcag
accgtgatgaaacagatccaatcacaaaaccccaatgcttttattaataaaaacgcagac
cagctcaaagccgacgccaagctaaatctgccaaattatgatgtattgccatcacagcaa
gcgctagaggccgctatcagcgcccaaaaacagaaatatcgtcggcggataaatactcct
gtcgcacagccagcgcctaaagcaaagccccatacagctaaagtgcaaaacaactcagca
cctgcagccaagccacaaaaaaaaccaaccattaccaagaccttgccaagagcgcagttt
tctgtattggctccaggacataatggcaatgccgatggcacccaaaccaaatcagcggcg
gccacaggcaatggacttagcacagacatactagctactttaaaagcatcacggcaagcg
gcagcctctcaggcccaaagcttgtccaagaccagcagtgcacttgacagttatacgcga
aaaattcaattacagaatcaaaaattggcagagctgcaagctcgtctcaaaaaactacgc
aaccaataa
DBGET
integrated database retrieval system
