Psychrobacter sp. KFRI-CH2-11: AADH33_07015
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Entry
AADH33_07015 CDS
T11272
Name
(GenBank) exonuclease SbcCD subunit D C-terminal domain-containing protein
KO
K03547
DNA repair protein SbcD/Mre11
Organism
psyk Psychrobacter sp. KFRI-CH2-11
Brite
KEGG Orthology (KO) [BR:
psyk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psyk03400
]
AADH33_07015
DNA repair and recombination proteins [BR:
psyk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AADH33_07015
Archaeal homologous recombinant proteins
AADH33_07015
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
PDCD7
TMP_N
Motif
Other DBs
NCBI-ProteinID:
WZH81145
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All DBs
Position
1696409..1698004
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AA seq
531 aa
AA seq
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MPIKPLNILHTSDWHLGRRLYGRMRYDEFAAFLGWLETTISEQHVDVLIVAGDIFDTMTP
SNRAQALYYEFLGRVSRSCCQHIVIVAGNHDSPTFLDAPSHVLKFLNVHVIGTACEDLND
EVLVLDDTDGTPHCIIAAVPYLRDRDVRSSSAGESMDSKDANVIKGIRAHYDDVASIAKS
KQAQLIKSHQRHIPIIATGHLFAAGGTTTEDDGVRELYVGSLGKISADMFDEGFDYVALG
HLHVPQRVGGRETIRYSGSPIAMGFGEARQQKQVLLIQFGAVENVFNDKKPTSNNTANTA
ARTIASNVPQIPNTVATIEKSVEKAAKKVANQENGFMDDLFGFDEPSANDNKDEVAKVAV
IESASASQDEHNQLLPIDVAPTNKMLYRNDSNQMQVTSLSIPKFQRLAQVSGDLQSIQQA
INSTTQSLDDTESVWLEVIYTGDELVSELREHIQAMVDGLPCEVLKIKNTRTYNKVLNQQ
QTSETLQDLDEEEVFERCLLLNKVADEQKNALREAYQQIIYNLRHEDTQAE
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgcctataaaacctctaaatatcttacatacctcagattggcatttggggcgcaggctc
tatggtcgtatgcgctatgatgagtttgcagcgtttttgggttggcttgaaaccaccatt
agcgagcaacacgtagatgtactgattgtcgccggcgacatctttgacaccatgacccca
agcaaccgagcgcaggcgctgtattatgagtttttggggcgagtctcacgctcctgctgc
cagcatatcgtcatcgtcgccggtaatcatgactctccgacttttttggatgcaccaagt
catgtgcttaagttcttaaacgttcatgtcattggcaccgcttgcgaggacttaaacgat
gaggtcttggtattagatgacacggacggcacgccgcactgcattatcgctgctgtgcct
tatctgcgtgatcgtgatgtccgtagcagcagcgctggcgagtcgatggacagcaaagac
gccaatgtcatcaaaggcattcgcgcccattatgatgacgtggcaagtatcgctaaatcc
aagcaagctcaattaataaaatcccaccaacgccatattccgatcattgccacaggtcat
ctatttgcagctggtggcacaacaaccgaagacgacggcgtacgtgagctttatgtcggc
tcactcggcaagatctctgctgatatgtttgatgagggctttgattatgtcgcccttggg
catttgcatgtgccgcagcgggtcggcggccgtgagaccattcgctattcaggttcgccg
attgcgatgggttttggtgaggcacgccagcaaaaacaagtgttgctcatacagtttggc
gcagtagaaaatgtgtttaatgataaaaaaccaacgtcaaacaataccgccaatactgct
gctcgtaccattgcaagcaatgtgcctcagatccccaatacagttgccacaattgaaaaa
tcggtagaaaaagccgctaaaaaagtagccaatcaggagaatggctttatggatgatttg
tttggatttgacgaaccgtcggccaatgacaataaagatgaggtggcaaaagttgctgtc
atagaaagcgcttctgctagtcaagacgaacacaatcaattactgcctattgatgtcgct
cctactaataaaatgctgtaccgtaatgattctaatcagatgcaagtgacctccctatcc
attccaaaatttcaaagattggcacaagtctcaggtgatctacagtctatccaacaggcg
attaatagtactactcagtctttagatgacacggagtctgtttggctcgaagtgatttac
acaggtgacgagctggtcagcgagttacgtgagcatattcaggcaatggtagatggcttg
ccgtgtgaggtactaaaaataaaaaatacccgtacctataataaagtgctaaatcagcag
caaacctctgagacactacaagacttggatgaggaagaggtgtttgagcgctgtttgctt
cttaacaaggtcgcagatgaacaaaaaaacgccctgcgagaagcctatcagcaaatcata
tataacctgcgtcatgaagacactcaggcggaataa
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