Psychrobacter sp. KFRI-CH2-11: AADH33_08345
Help
Entry
AADH33_08345 CDS
T11272
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K14159
ribonuclease HI / DNA polymerase III subunit epsilon [EC:
3.1.26.4
2.7.7.7
]
Organism
psyk Psychrobacter sp. KFRI-CH2-11
Pathway
psyk03030
DNA replication
psyk03430
Mismatch repair
psyk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psyk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AADH33_08345 (dnaQ)
03430 Mismatch repair
AADH33_08345 (dnaQ)
03440 Homologous recombination
AADH33_08345 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psyk03032
]
AADH33_08345 (dnaQ)
03400 DNA repair and recombination proteins [BR:
psyk03400
]
AADH33_08345 (dnaQ)
Enzymes [BR:
psyk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AADH33_08345 (dnaQ)
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
AADH33_08345 (dnaQ)
DNA replication proteins [BR:
psyk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AADH33_08345 (dnaQ)
RNase H
AADH33_08345 (dnaQ)
DNA repair and recombination proteins [BR:
psyk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AADH33_08345 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_H
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
WZH79050
LinkDB
All DBs
Position
2030851..2032440
Genome browser
AA seq
529 aa
AA seq
DB search
MSDSPHSMLHTHTDHAADPLAAKANTTVAYTDGACKGNPGAGGWGAHLIFSDGRTQDLYG
GEAQTTNNRMELMGAIQALTHSPQAHTLEIWTDSSYVKNGITDWIAGWKKRGWKTASKKP
VANQDLWQQLDALCQQRDVAWHWVKGHAGHAGNEKADELANLGVTSSSEVQATTELPKKK
DSLTVEASQRRHDDWLTFDPLGFDMIDDDTDETPADSSQSQDTHSIADHPIISSHTQRPT
EQATMTDANPNMHMPNTDTASVSQADTQTASAEEMPKFDGDTSRASPYFKPLLPKPIHRH
DSDRQLIMDTETTGLDPLKGDRIIEVGIVELVGRKFTGEKLHVYINPQRGMDEEVIRIHG
ISEAFLADKPTFDQVAQALYDFMDGAEVIAHNATFDINFLSMEFAKVGLHDFAERIQVTD
SLAMAKQQYPGQKNTLDALVRRLDVGKQDRTFHGALLDSEILAEVYLAMTGGQVALAIEE
DTQTDGGQTGHAHFSELADLLLQSPMDESASQHWYASLAEDFPALKNNM
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacagtccgcattcgatgcttcatacccataccgaccacgcggccgatccgctc
gcggccaaagcaaacacgacggttgcctataccgatggtgcgtgtaagggcaaccctggt
gctggcggttggggggcgcacctgatatttagtgatggccgcacccaagacctatatggc
ggcgaagcacaaaccaccaacaatcgcatggagctaatgggcgcgatacaagccttaacg
cacagcccgcaagcgcatacccttgagatttggacagactcaagctatgtcaaaaacggc
atcactgattggatcgctggctggaaaaaaagaggctggaagacggcgagcaaaaaacca
gtcgccaaccaagatctctggcagcagctagatgcgctctgtcaacagcgcgatgtcgct
tggcactgggtcaaaggacatgctggacatgctggcaacgaaaaagccgacgagctggcc
aatctgggggtgacctccagcagtgaggtacaggcaacaactgaattgcctaaaaaaaaa
gactccttgacggttgaggcaagccagcgccgccatgacgattggctaacctttgacccc
ttagggtttgatatgatcgatgacgatacagatgagacgccagcggacagctcgcaaagc
caagatacccatagcatcgctgaccatccaatcatctctagccacactcagcgaccaaca
gagcaagcaaccatgactgacgccaacccaaacatgcacatgccaaatactgacaccgcc
tcagtcagccaagctgacacacaaacagctagcgcagaagagatgcccaagtttgatggc
gataccagtcgtgctagcccttactttaagccactattgccaaagcctatccatcgccat
gactctgatcgccagcttatcatggatactgagaccacaggtcttgaccctctaaagggc
gaccgcatcatcgaagtgggtatcgtcgagctggtcggccgtaagtttacgggcgaaaag
ctccacgtctatatcaatccacagcgcgggatggacgaagaagtgattcgtattcacggt
atctctgaggcgtttttggcagacaagccgacctttgaccaagtcgcacaagcactgtat
gattttatggatggcgctgaggtcatcgcgcataacgctacctttgatatcaatttcttg
agcatggagtttgccaaagttggcttgcacgacttcgccgagcgcatacaggtcactgac
tctttggcgatggccaagcagcaatacccaggacaaaagaacacgctagatgcgttggtg
cgccgcttagacgtcggtaagcaagatcgtacttttcacggggcattactagattcggag
atcttggccgaggtctatctggcaatgaccggtggacaggtcgctctcgccatcgaagaa
gacacacaaaccgacggcggacagaccggtcatgcccatttttcggagctggcagatcta
ttactacagtcgcctatggatgagagcgcaagccagcactggtatgcgtcactggcagaa
gacttccctgccctcaaaaacaatatgtag
DBGET
integrated database retrieval system
