Psychrobacter sp. KFRI-CH2-11: AADH33_12555
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Entry
AADH33_12555 CDS
T11272
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
psyk Psychrobacter sp. KFRI-CH2-11
Brite
KEGG Orthology (KO) [BR:
psyk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psyk03016
]
AADH33_12555 (truB)
Enzymes [BR:
psyk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AADH33_12555 (truB)
Transfer RNA biogenesis [BR:
psyk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AADH33_12555 (truB)
Prokaryotic type
AADH33_12555 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
WZH79823
LinkDB
All DBs
Position
complement(3031010..3032053)
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AA seq
347 aa
AA seq
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MSIPAKQNDKIKVSGVILVDKPYGLTSQQVVSKVKYLFKSPTHDSKKAGHTGTLDPMATG
LLPICLGEATKFSHYQLDADKSYQATILLGGQTDTGDAQGQVVATASVPTFDAAALEELA
QQFLGAQQQIPPMYSALKKDGKKLYEYARAGIDVVREPRDIIIRSIRLTALDHEQIQLTV
TCSKGTYVRVLGEDIAKALGTLGHLTALRRLQVGSFKVDNAITLSALEDLPLAERFTQLM
PIDACIEIPAQMTLTAEQCQRVHMGQRLNVSAQLTDELQAYISQNIRQSASSQVVEATAA
HETTVSNTALASDVPVDIRLLDDQGQFLGLGAVSLNGRLQPKKLIQR
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgtctatcccagcgaagcaaaatgacaagataaaagtctcaggggttattttggtggac
aagccctatggtctgacctcgcagcaagtggtgtccaaggttaagtatttgtttaaatcc
ccaacccatgacagcaaaaaagcaggccatacgggaacgctcgaccccatggccaccggt
ctgttgccgatttgtctgggagaggccaccaagtttagccactatcagctagatgccgac
aaatcttatcaagccaccattttgcttggcggccagacagatacaggagatgctcaaggt
caagtagttgcaacggcttctgtgccgacatttgatgctgccgctttagaggagcttgcc
cagcagtttttaggcgcgcagcagcagataccaccgatgtactctgccctaaaaaaagac
ggtaaaaagctctatgaatatgcccgcgctggcatcgacgtcgtgcgtgagccgcgagat
attattatccgctctattcgcctaacagcgctcgatcatgagcagattcagctaaccgtc
acttgtagcaaaggcacttatgtgcgcgtgctgggtgaagacatcgctaaagcgctcggc
acactcggccatctcaccgccctgcgccgcttacaagtgggtagctttaaggttgataat
gccatcactttatctgctctagaagatctgccattggccgagcgtttcacgcagctgatg
ccgatagatgcctgtatcgagatacctgcgcaaatgacgctgacggccgagcaatgtcag
cgtgtccatatgggacagcgtctaaatgtgtctgcacaactgacagatgagctacaggct
tatatatcccaaaacattcgccagtctgccagcagccaagtagtagaagctactgcggct
cacgaaacgactgtcagcaacacagctctcgcctctgacgtaccagtagatattcgtctg
ctagatgaccaaggtcagtttttgggtttgggtgctgtcagtctaaacggtaggctacaa
ccgaaaaagcttattcaacgttaa
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