Psychrosphaera ytuae: J1N51_02495
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Entry
J1N51_02495 CDS
T07123
Name
(GenBank) efflux RND transporter permease subunit
KO
K18299
multidrug efflux pump
Organism
psym
Psychrosphaera ytuae
Brite
KEGG Orthology (KO) [BR:
psym00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psym02000
]
J1N51_02495
01504 Antimicrobial resistance genes [BR:
psym01504
]
J1N51_02495
Transporters [BR:
psym02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
J1N51_02495
Antimicrobial resistance genes [BR:
psym01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexEF-OprN [MD:
M00641
]
J1N51_02495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
RNA_pol_Rpb1_7
Motif
Other DBs
NCBI-ProteinID:
QTH64376
UniProt:
A0A975DDI9
LinkDB
All DBs
Position
540862..544011
Genome browser
AA seq
1049 aa
AA seq
DB search
MKFSHFFINRPIFAVMLSMVILIAGAISLTQLPVSEYPEVVPPTVVVNASYPGANPKVIA
ETVATPLEQEINGVENMLYMFSQATSDGRLTLTVTFALGTDLDRAQVQVQNRVNSAVPRL
PQEVQRLGVVAEKSSPDLALVVHLFSPEKTHDISYLSNYADIYVKDQLARLGSVGDVRVF
GGGQYALRVWLNPEQLAEKKLTASDVVNAIRSQNRQVAAGSLGSQPTELENQFQILLNVK
GRLDNIEEFNDIVIRVGENGEITRLKDIGRIELGQNTYSLRAMLDGQPAVAIPIFQRPGS
NAIELSDDVRSVMAEASKAFPAGVEYDIVYDPTIFVRGSIDAVIKTLLEAVLLVVIVVIL
FLQTWRASIIPLIAVPVSLVGTFAAMQWLGVSINTLSLFGLVLAIGIVVDDAIVVVENVE
RNIEEGLTPYEATKQAMTEVTGPIIAIALVLCAVFIPTAFITGLSGQFYKQFALTITIST
LISAVNSLTLSPALSAILLKPHGAKPDMPTRVLDKVFGGWLFKPFNRMFDKASNAYVGLV
KRLIRISGIVFVIYLGLLLLTSKMFDAIPGGFIPQQDKQYLVAIAQLPDAASLDRTEAVV
KEMEQIALATPGVKHTVSFPGLSVNGFSNSPNSGIVFVTLDDFENRTAPNLSAMAIAGQL
NGAFYGIDEAFVAVFPPPPIQGLGTTGGFKVQIEDRANLGFEALFNNLQAVIGNAYKEPE
LTGLYSSFRIQVPQMDIEIDREQALVQGIPLSEVFDALQIYLGSVYVNDFNLFGRTYQVT
AQADAEYRLDPEQILQYKIRNRQGQMVPLGSILTVTPTTGPDRVMHYNGYPSAELNGSPA
PGYSSDQAQKAIERVLASTLDEGMEYEWTEVTYQQILAGNTMVYVFPLVVLLVFMVLASQ
YESLRLPLAIILIVPMTILSALVGVWLVGGDNNIFTQIALIVLVALACKNAILMVEFAKE
KTDAGLTTLDAIIEACRLRLRPILMTSIAFTAGVVPLVLATGAGAEMRETMGIAVFSGMI
GVTIFGLLFTPVFYMLVANKNNKKQVVQE
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgaaattttctcatttttttattaaccgtccaatattcgctgtgatgctgtcgatggtg
atacttattgccggggcaatatcactgactcagttgccagttagtgaatacccggaagtc
gttccacctactgtcgttgttaatgcaagctaccctggagcaaatccaaaagtaatcgct
gaaaccgtagcaacaccactagaacaagaaattaatggtgtagaaaacatgttgtatatg
ttttctcaagcaaccagtgatggtcgattaaccttaacggtaacctttgcccttggaact
gaccttgaccgagcacaagtccaagttcaaaaccgagtaaacagcgcagtgccgcgccta
cctcaagaagtacagcgattgggtgtagtagcagaaaagtcctcaccggacttagcctta
gttgttcacttgttttcgccagaaaagacccatgacattagctacctatcaaattacgca
gacatttacgttaaagaccaattagcgaggttgggttctgtaggtgacgtgcgagtgttc
ggtggtggtcaatacgcgcttcgggtgtggttaaatccggagcaactggctgagaaaaag
ctcacagcctccgatgtcgtaaatgcgattcgtagccaaaaccgtcaagtagcagcaggc
tctttgggctcacaaccaacggagttagagaatcaatttcagatattattaaacgtcaaa
ggccgattagacaacatcgaagagtttaatgacatagttattcgcgttggtgaaaacggt
gaaattacgcgtctaaaagacataggtcgaattgagctaggacaaaacacctactctctc
agagctatgttggacggccaacctgcggtcgcaatcccgatcttccaacgtccgggttcc
aatgcgatagagctttctgatgacgttcgttcggtgatggctgaagcttctaaagcattt
cctgccggcgtcgaatacgacatagtatacgacccaacgatcttcgtccgtggctctatt
gatgccgttatcaaaacattactcgaagctgttttgttagttgtcatcgtcgttatttta
ttcttacaaacttggcgcgcctcgattattcctttgatcgccgtacctgtgtcacttgtt
ggtacctttgcagcgatgcaatggttaggtgtatcaattaatacgttatcgttattcgga
ttagtattggccattggtattgtcgttgacgatgctattgttgtcgtagaaaacgtcgaa
cgaaacattgaagaaggtcttactccatacgaagcgacaaaacaagcaatgacagaagtt
acgggtcctattattgccattgcgttagtcttgtgtgccgtgtttatccccaccgcattt
attacgggcctatctggtcaattttacaaacaattcgcattgaccattactatttcgaca
ttgatatctgctgtcaattcattaactttgtcacccgcactttcggcaattctgttaaaa
cctcatggggccaaaccagacatgccaacccgagttttagataaggtctttggcggttgg
ttattcaaaccattcaatcgcatgtttgacaaagcgtctaatgcttatgtgggccttgtt
aaacgtttgatccgaatctccggcattgtttttgtcatctaccttggcctgttgttgctt
acatcaaaaatgtttgatgcaattcctggtggatttattcctcagcaagacaagcaatat
ttagtcgcaatagcgcaactgccagatgcagcgagcttagatcggaccgaagcggtagta
aaagaaatggagcaaattgcgttagcaacacctggtgttaaacacacagtttcgtttcca
gggctttccgttaatggtttttcgaatagccctaatagcggtattgtctttgttactttg
gatgattttgaaaatcgtactgccccaaatttgtcagcgatggcgattgcaggtcaactt
aacggcgcgttttacggtattgatgaggcatttgtcgccgtattcccaccgccgcccatt
caaggattgggcacaacaggtggctttaaagtgcagatagaagaccgcgctaaccttggc
tttgaagctttgtttaacaaccttcaagctgtgattggcaatgcttataaagagcctgag
ttaacgggtttgtactctagtttccgtatccaagttccgcaaatggacattgagatcgac
cgcgaacaagcgttagttcagggtataccgctcagtgaagtgtttgatgcgctacaaatt
tatttagggtcagtgtacgttaatgactttaacttatttggtcgtacctatcaggtaaca
gcacaagcagacgctgagtatcgcctcgatccagagcaaattttacaatacaagatccgt
aaccgtcagggccaaatggtgccattaggcagtattcttaccgtaacgccaacgacgggt
cccgaccgcgttatgcactataacggctatccgtcagctgagttaaatggctcgcctgca
ccaggttattcttcggatcaggcgcaaaaagccattgagcgcgtccttgctagtacctta
gacgaaggtatggagtacgaatggacagaagtgacctaccaacaaatcctagccggtaat
acgatggtctatgtattccctcttgtggtgttacttgttttcatggtgcttgcatcacaa
tacgagagcttacgtctacctttggcaatcattttaatcgtgcctatgacaattttaagt
gcccttgtaggtgtatggctggtcggtggtgacaataatatcttcacccagattgcgctg
attgttttggttgctctggcctgtaaaaacgcgattttaatggtcgaatttgccaaagaa
aaaaccgatgcgggtctaaccacattggacgcgatcattgaagcttgccgccttcgatta
cgaccaatattaatgacctctatcgcctttaccgcgggcgtcgtacctctggttttagct
acgggtgccggcgctgaaatgcgcgagactatgggtatagccgtattctcaggaatgatt
ggcgttacaatatttggcttgttgtttacccctgttttttatatgttggtcgccaataaa
aataataaaaaacaggttgtacaggagtag
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