Psychrobacter sp. PAMC27889: E5677_00110
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Entry
E5677_00110 CDS
T06076
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
psyp
Psychrobacter sp. PAMC27889
Pathway
psyp01501
beta-Lactam resistance
psyp01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
psyp00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
E5677_00110
01503 Cationic antimicrobial peptide (CAMP) resistance
E5677_00110
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psyp02000
]
E5677_00110
01504 Antimicrobial resistance genes [BR:
psyp01504
]
E5677_00110
Transporters [BR:
psyp02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
E5677_00110
Antimicrobial resistance genes [BR:
psyp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
E5677_00110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
Prominin
Motif
Other DBs
NCBI-ProteinID:
QCB29513
LinkDB
All DBs
Position
26830..29928
Genome browser
AA seq
1032 aa
AA seq
DB search
MSLNVSAYSIKNPLVAILLFVLLTLGGIYGFMKMKVQQFPDIDLPAVVVTVTLPGAAPSQ
LENDIAKKVENKLTSIEGVKHIRTTLQTGAATMVTEFVLEKDIQEAVDDVRSAVGEVRGD
LPAAANDPIITKVSTAGFPVVTYSVSADNMSVEDLSWFVDDTVTKRLSDIPGVSTVGRIG
GLQREITVAADPITLSGLKFSIAQLSDQIAGIQQDSSGGEAEVGKTTQTIRVLGAVERAS
ELNDLQVAVPTGGTQALGRMAQITDGAADPSSIAKLDDKTVVAFNITRSRGASEVDVMAL
VDAELAKLTADESNITIEKVYDRATPISEDYDASLRMLIEGGLLAVVVVFLFLRNIRATI
VAAVALPLSVIPTFLGMYLFGFSLNIISLLALSLVIGVLVDDAIVEVENIIRHLRMGKTP
YEAAMEAADEIGLAVVATTFTLIAVFLPTAFMGGIVGQFFRQFGWTAALSIFASLMVARL
ITPMMAAYILRPEKKHVEKQSALMGWYLKIVGWTLHHRWITIGATLILFVASLTLVKLLP
TSFIPDNDIDQTRVEIELTPDVALADTERVTALASERILAMPEVTHIFSSIGEAQATMDS
SSSGSSKSENIAGLDIVLAPRAERASKQEIERKISRVLSAVPGARFTVGLSSGGESGYNF
SMTSTNPQLLEQTVQQVMSEIRALPSAGSVTSDRSLPRQELTVTPDRLAMADKGVTTQDI
ATTLRIATVGDYEQRLSKLNLDTRQIPIVIRLPDVAKQNVSQLEGLYVPSAAPAGQGVRV
GEVADLDFGTGPAQISRLDRERAISITVQPANGELGDLVQAVKAVPAMQTLPSSITIIDQ
GQAENMAELFNGFIIAMSVGVVCILGVLILLFGRILQPFTILMALPLSIGGAFVGLVITN
SSLSMPSMIGFIMLMGIATKNSILLVDYALIAQRRGLARFEAIVDACRKRARPIIMTTIA
MGAGMLPLVFGWGDADPTFRRPMAAAVLGGLVTSTLLSLVVIPVVYTLMDDLSAWFAKWL
VPSGKPIATTEK
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgagcttaaacgtctccgcttattcgattaaaaaccctctggttgctattttgctgttt
gtgctgctgacgttgggcggcatctatggctttatgaaaatgaaagtgcagcaatttcca
gatattgacttgccagcggtcgtggtcaccgtaaccttaccaggggctgctccttcacag
ctggaaaacgatattgcaaaaaaggtagaaaataagcttaccagtattgaaggcgtcaag
cacatcagaacgacgcttcaaacgggtgcggccaccatggtgactgagtttgtgttagaa
aaagacattcaagaagctgtcgatgatgtgcgctcggcagtcggtgaggtgcggggcgac
ctgccagcagcggctaatgatcctatcattacgaaagtctcgaccgctggcttccctgtg
gtgacttactctgtttctgccgacaacatgagtgtggaggacttgtcttggtttgttgat
gatactgtcactaagcgtctgtccgatattccgggtgtcagtacggtcggccgtattggc
ggactgcaacgcgaaatcactgttgccgctgatccaataacgcttagtggtttgaagttt
tcgattgcccaactatcggatcaaatagcaggtattcagcaagacagctcaggcggtgaa
gccgaagtgggcaaaaccactcagaccattcgagtgcttggcgcggttgaacgtgccagt
gagctgaatgatttgcaagtggcagtgccaacaggtggcacgcaagcgctgggtcgtatg
gcacaaatcacggacggcgctgctgatccaagctctattgccaagctggacgataaaacg
gtggtggcatttaatatcacccgatcacgaggtgccagtgaggttgatgtgatggcgctg
gtcgatgcagaattggccaagcttacagcagatgaaagcaacatcactattgaaaaagtc
tacgatcgagcgacgcccatttctgaagactatgatgcatcgttacgtatgctgattgaa
ggtggtctattagcagtcgtggtagtttttttattcttacgcaatattcgagccaccatt
gtggccgccgttgctttgcctttgtctgtcatacctacttttttaggcatgtatttgttt
ggctttagtctcaatatcatatcgctactggcattgtcattggtgattggcgtattggtt
gatgatgcgatcgttgaggttgagaatatcatccgccaccttcgtatgggtaagacgcct
tatgaagcagcgatggaggccgctgatgaaatcggcttagcggttgtcgctactaccttt
actctgattgcagtatttttaccaacggcctttatgggcgggattgtggggcagttcttt
cgccagtttggctggacggcagccttatcgatttttgcatcactaatggtggcacgtttg
atcacccctatgatggccgcctatatcttgcgacctgaaaaaaagcatgttgaaaaacaa
agcgcgttgatgggctggtatctcaaaatagtaggatggacactgcatcatcgttggatc
acgataggagcaaccctgatattatttgtggcttctttaacactggtaaagttattgccc
acgtcttttattcctgataatgatattgatcaaacccgtgtggagattgaactgacgcct
gatgtagcactagcagatactgagcgagttactgcgctggcaagcgagcgtattttggcg
atgcctgaagtgacccatattttttcttctatcggtgaagcacaggccacgatggattca
agctcaagtggcagcagcaaatcagaaaatatcgcaggattagatattgtattggcgcca
agagcagagcgagcatctaaacaagagattgaacgaaaaattagtcgtgtgttgtcagca
gtacctggtgctcgctttaccgttggtctatcaagtggcggtgagagtggttataacttc
tctatgaccagtaccaatccgcagttacttgaacagactgttcagcaagttatgtcagag
attcgagcattacccagtgcaggttcagtgaccagtgaccgcagtttgccgcgacaggag
cttactgtaacgccagacagactggcgatggcagataagggcgtgaccacacaggatatc
gcaacgacattacggatcgcgaccgttggtgattatgaacagcgcttgtccaaactcaat
ctagacacacggcagattcctatcgttattcgtctgccagatgttgccaagcaaaacgtc
agtcaattagaagggttatacgttcccagcgctgcaccagcaggacaaggtgtgcgtgta
ggcgaggtcgctgaccttgattttggtacagggcctgcacagatcagcaggcttgatcga
gagcgtgcgattagtattacggttcagccggcaaatggcgagcttggggatttggtacaa
gcggtcaaagcggtccctgctatgcaaaccctgccgtcatcgattacgattattgatcaa
ggtcaagccgaaaacatggcggagctatttaatggttttatcatcgctatgtcggtaggg
gtggtttgtatcttgggcgtccttattttgctatttggccgtatattgcaaccatttact
attttaatggcgctgcctctctcgattggcggtgctttcgtgggcttggttattaccaat
agtagtctctcaatgccttcaatgattggttttattatgctaatgggtatcgcaaccaaa
aactctatcttactggtcgattatgccctgattgcacagcgtcgtggtttggcacgtttt
gaggcgatcgtcgatgcttgtcgtaaacgtgcgcgtcctatcattatgacgaccatcgcg
atgggtgcaggtatgttgccattggtatttggttggggagatgctgaccctacgtttaga
cgcccgatggctgctgctgtgttgggcgggcttgtgacgtctaccttattgagtttggtc
gtgattccagtagtttataccttgatggatgatctgtcggcttggtttgccaaatggctt
gttccaagtggaaaaccaattgctactaccgaaaaataa
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