Psychrobacter sp. PAMC27889: E5677_00300
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Entry
E5677_00300 CDS
T06076
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
psyp
Psychrobacter sp. PAMC27889
Pathway
psyp00300
Lysine biosynthesis
psyp00550
Peptidoglycan biosynthesis
psyp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psyp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
E5677_00300
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
E5677_00300
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psyp01011
]
E5677_00300
Enzymes [BR:
psyp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
E5677_00300
Peptidoglycan biosynthesis and degradation proteins [BR:
psyp01011
]
Precursor biosynthesis
Amino acid ligase
E5677_00300
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
SHMT
DUF1118
Motif
Other DBs
NCBI-ProteinID:
QCB29545
UniProt:
A0A7Z1YBJ7
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Position
69348..71111
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AA seq
587 aa
AA seq
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MTVSTSSLNRTTVTLQQLAESSNKHSLQQTLTAMIAASAQPPLAQALSTQTRRNQQDSIA
AIPFHQFCLDSRQLKKNDVFVLLKSQTLHSQKSRDYLIQAANSAAFILSEIDPIALLTTA
DMNTSSLADNLQSVAQQQLIALPCPVLYVPNIRDFLGDLIQAYLQYQQPVILPAIVAVTG
TNGKTTISQLVAQLAQLMGMSSAVMGTAGNGKLGALVQASHTTGDALAVQQFLYQMGQEN
ADLLALEASSHGLDQQRLQGMPASVAIYTNLSRDHLDYHADMAEYAAAKAKLFDKTHFPE
LTHAIINLDDEHAQIMLDMAHTSALTVWTYSLNPTKNATFVAATINPSLQGVEIAVRYNV
SNNTGDVHLDSTDANHDQTNTITVISPLLGRFNVANLLAAIAATVAIGTDIDHDIERIAA
VVPQLQGAVGRMQRVPSNEGCFIVDYAHTPDALQQVLASLKTHCDGQLWAVFGCGGDRDA
GKRPLMAQAGLAGADQIILTADNPRTEDPNIILQDMQAGMSAEQYQRTHIEPARQKAIEY
AVRQAAAADIVVIAGKGHETYQEINNVRYDFDDSVVLQNALQQAGRV
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtgtctacttcatcgctaaaccgcactactgtcaccttgcaacaattggccgag
tccagtaataaacatagtttgcagcaaaccctaacagcgatgatcgccgcatccgcgcag
cctccattggcacaggcattatcgacacaaactcgccgcaatcaacaagactcaattgcg
gctattcccttccatcagttttgtttggacagccgtcagctcaaaaaaaatgatgtgttt
gtcttattaaaaagccaaacactacacagtcaaaaaagtcgtgattatctgatacaagcg
gctaacagtgccgcatttatcttatctgaaatcgatcctattgctttactgacaacagcc
gatatgaatacttcttcattagcagataatttgcaatcggttgcacagcagcaactcatc
gcgctgccttgtcctgtcttatacgtgcctaatattagagattttttgggcgatttgatt
caggcgtatttgcagtatcagcaaccagtgattttgccagcaattgtagccgttacgggc
accaatggtaaaaccaccatcagtcaactggtcgcgcaattggcgcaattgatgggcatg
agtagtgccgtcatgggtacagcgggcaatggtaagcttggagcgttggtgcaagccagc
cacacgacaggggatgcgttagccgttcaacagttcttatatcaaatggggcaagaaaat
gctgatctactggcgttggaagcgagttcgcacggtcttgatcaacagcgcttacaaggc
atgccggcgtcagtggcgatttataccaatttgagccgtgatcatttggactatcatgcg
gatatggcagaatatgctgctgctaaagctaagctgtttgataaaacgcattttccagag
ttgacccatgccattattaatcttgatgatgagcatgcacagattatgctagatatggcg
cataccagtgctttaaccgtctggacatacagtctaaaccctactaaaaacgcaaccttt
gtcgccgctactatcaatccgagtttacaaggggttgagattgctgtgcgctataacgtc
agtaataatactggtgatgttcatcttgatagtacagatgccaatcacgaccaaaccaac
accatcactgtcataagtccattgttaggtcgctttaacgtggccaatttgctagcagcc
attgctgcaacagtggcgattggtactgacattgaccatgatatcgagcgtatcgcagcc
gttgtaccgcagttacaaggcgctgttgggcgcatgcagcgcgtaccatccaatgagggt
tgttttattgtggattatgcgcacacgcctgacgctttacaacaagtactcgccagtctt
aaaacccattgtgatggtcagctatgggcggtattcggttgtggtggcgaccgtgacgct
ggtaagcgcccattgatggcgcaagcgggcctggcaggtgcggatcaaatcatactcaca
gcggacaatcctcgtactgaagatccgaatataattttgcaagacatgcaagctggcatg
agtgctgagcaatatcagcgtacgcatatcgagcctgcacgccaaaaagcgattgagtac
gctgttcgacaagccgccgccgccgatattgtagtcatcgctggtaagggacatgagacc
tatcaagaaatcaataacgtgcgttatgattttgatgacagtgttgtcttacaaaatgca
cttcagcaagcgggacgagtataa
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