Psychrobacter sp. PAMC27889: E5677_03650
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Entry
E5677_03650 CDS
T06076
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
psyp
Psychrobacter sp. PAMC27889
Pathway
psyp01501
beta-Lactam resistance
psyp01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
psyp00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
E5677_03650
01503 Cationic antimicrobial peptide (CAMP) resistance
E5677_03650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psyp03036
]
E5677_03650
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psyp02000
]
E5677_03650
01504 Antimicrobial resistance genes [BR:
psyp01504
]
E5677_03650
Chromosome and associated proteins [BR:
psyp03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
E5677_03650
Transporters [BR:
psyp02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
E5677_03650
Antimicrobial resistance genes [BR:
psyp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
E5677_03650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
RND-MFP_C
HH_MFP_RND
HH_EMRA
BSH_CusB
HH_YBHG
BSH_CzcB
Fez1
Biotin_lipoyl
HH_CzcB
Beta-barrel_RND_2
CCDC93_CC
BSH_YknX
Golgin_A5
CCDC39
CzcB_C
She9_MDM33
HH_AprE
YknX_C
Motif
Other DBs
NCBI-ProteinID:
QCB30163
LinkDB
All DBs
Position
complement(854747..856147)
Genome browser
AA seq
466 aa
AA seq
DB search
MKHSTLALVIASVLSGAVLIGCDKNEDAAGEQAAQQQMPPAVVNVQTVTLETVPQVQTFS
GRTAAYQTADVRPQVNGVIEEVLFREGSNVKEGQPLYRINTDNYASSVTSGQAAVQQAQA
NYQTAQANNANAKAELASRQASLAQAQNDLQRLEGLVSIDAISKQQYDQAQTQVRTAQAA
VQSAAAAVGQTQAGIESARAGIQTAQAGLAASNLDLNRTIVRAPLTGRTDRSSVTAGTLV
SAGQADPLVTISRLDPIYVDISQSSSELLKLRQQISEGKAQPGMNSVELVLEDGSVYPVR
GKLALSEAKVDESTGAVTLRAIFPNSNNLLLPGMYVTARLTQSVISNAALVQQSAVMRTP
KGETQVYITDQNNKIQVRPVTIDGTYNGQWVVTDGLQAGDKVVVIGGSKVKPEQEVVVKP
LENANPAPSAQNASTAKTPQQAAKTVDKKPAGNDNSSEKQTEAAAQ
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaagcactctactcttgcgcttgtaatagcatctgtactatctggagctgtacttatc
ggctgtgacaaaaacgaggacgctgctggtgaacaagccgcacagcagcagatgccgcct
gcggttgtcaacgtgcagactgtcaccttagaaaccgttcctcaagtacaaactttttct
ggacgtaccgcagcttaccaaacggctgacgttcgcccacaggtcaacggtgtcattgaa
gaagtactgttccgtgaaggaagtaacgttaaagaaggccaaccactttaccgtattaat
accgataactatgcgtcttctgtcaccagtggtcaggcagctgtgcaacaagcacaagcc
aactatcagacagcacaggcaaataacgccaatgcaaaggctgagctcgccagccgtcag
gcatcattggcgcaagcgcaaaatgatctacagcgcttagagggcttagtaagcattgat
gccatctcaaagcagcagtatgatcaagcgcaaacacaagtacgtaccgcgcaagcagcg
gtacaaagcgctgccgcggctgtcggacaaacacaagcgggcatcgaaagcgcaagggct
ggtattcaaacggctcaggcgggtttagcggcaagtaacttagatcttaatcgtactatt
gtacgtgcgccacttactggtcgtacagatcgctctagcgtgactgctggtacattggtg
agcgcaggtcaggctgatccgctagtcactatttcgcgcttagatcctatttatgttgat
atcagtcagtcctcatctgagctattaaagctacgtcagcaaatatctgaaggcaaggca
cagccaggtatgaactcagttgagttggtattagaagacggctcagtgtatccagtacgc
ggcaagcttgctttgtctgaagcaaaagttgatgagtcaacaggcgctgttactttacga
gctatcttcccgaatagtaataatctgttgttaccaggtatgtatgtaactgcccgcttg
acacaaagcgtgatcagtaatgcagcattggttcagcaaagtgcggtaatgcgtacacct
aaaggggaaacgcaagtttatatcactgatcaaaacaataaaattcaagtacgtccagtg
accatcgatggtacttacaatggacaatgggtagtaacggatggcttgcaagcaggcgat
aaggttgttgtcattggtggcagtaaggtcaaacctgaacaagaagtggtcgtaaaaccg
ttagaaaatgccaatccagcaccttctgcacaaaacgcctcgactgccaaaacgccgcaa
caggctgcaaagacagtggataagaaaccagctggcaatgataattctagcgaaaaacaa
acagaagccgctgctcaataa
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