Psychrobacter sp. PAMC27889: E5677_04790
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Entry
E5677_04790 CDS
T06076
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
psyp
Psychrobacter sp. PAMC27889
Pathway
psyp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psyp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
E5677_04790 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psyp03400
]
E5677_04790 (nth)
Enzymes [BR:
psyp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
E5677_04790 (nth)
DNA repair and recombination proteins [BR:
psyp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
E5677_04790 (nth)
Prokaryotic type
E5677_04790 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
QCB30369
UniProt:
A0A7Z1YD32
LinkDB
All DBs
Position
complement(1120053..1120748)
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AA seq
231 aa
AA seq
DB search
MSKTVKHKTADTPPSRRMPNRDVRPFFEKLAATIDEPVTELNYASNFELLIAVILSAQAT
DVSVNIATQQLYPVANTPEAILALGEDGLKAYIKNIGLYNAKAKNVIKTCRDLIEKFDST
VPDNRKDLESLAGVGRKTANVVLNTAFGQPTMAVDTHIFRVGNRTGLATGKNVLIVEEKL
VERIPDDFIVDAHHYLILHGRYTCQARTPKCGACPVYGECMFKDKATFLEL
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaactgtcaaacataaaacagccgatacaccgccatcgagaagaatgcccaat
cgtgatgtacgtccattttttgaaaaactggcggcgacaattgatgaaccagttactgaa
ctcaattatgccagcaattttgagttattgattgccgtcatattgtctgcacaggcaacg
gatgtgagtgtcaacattgctacccagcaattgtatccagtagcgaatacacctgaagcg
atattggcattgggtgaagacggtttaaaggcgtacattaaaaacattggcttatacaac
gccaaagccaaaaacgtcatcaaaacctgccgcgatttgattgagaaatttgatagcact
gtccctgataatcgcaaagatttagagtcactagcgggcgttgggcgtaaaacagccaat
gtggttttaaacacagcgtttggacaaccaacgatggcggtcgatacgcacatctttcgc
gtcggcaatcgcacggggcttgccactggtaaaaacgtcttgattgtagaagaaaaactg
gttgaacgtattccagacgacttcatcgttgatgcgcatcattaccttattttgcacggt
cgctatacctgtcaagctcgcacaccgaaatgcggcgcctgccctgtctatggcgagtgt
atgtttaaagacaaagccacgtttttagaactataa
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