Pseudomonas sp. Y39-6: HXW90_05310
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Entry
HXW90_05310 CDS
T11426
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
psyq Pseudomonas sp. Y39-6
Pathway
psyq00300
Lysine biosynthesis
psyq00550
Peptidoglycan biosynthesis
psyq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psyq00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HXW90_05310
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HXW90_05310
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psyq01011
]
HXW90_05310
Enzymes [BR:
psyq01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
HXW90_05310
Peptidoglycan biosynthesis and degradation proteins [BR:
psyq01011
]
Precursor biosynthesis
Amino acid ligase
HXW90_05310
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QPO18965
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Position
1173828..1175291
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AA seq
487 aa
AA seq
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MSLSLNKIFAHAGRDLLIRELTLDSRNVRAGDLFLAVPGGKYDGRAHIADALQRGAAAVA
YEVDGATVLPITDVPLIPVKGLAAQLSDIAGRFYGDPSRHLNLIGVTGTNGKTSVTQLVA
QALDLLGQHCGIVGTLGTGFYGALQSGLHTTPNPIAVQATLADLKKAGAKAVAMEVSSHG
LHQGRVAALAFDVAVMTNLSRDHLDYHGTMQAYAAEKAKLFAWNDLKCRVVNLDDAFGRE
LAAQDSEARLISYSLEDSRAYLYCREAQFNDEGVRATLVTPQGEHHLRSTLLGRFNLSNV
LAAIGALLGLDYALDEILRVLPKLEGPAGRMQRLGGGSQPLVVVDYAHTPDALEKVLLAL
RPHAKGKLLCLFGCGGDRDRGKRPLMAEIVERLADGVLVTDDNPRSEDPSQIFDDIRVGF
KDPSKASFIAGRGAAIAQLIASASVDDVVVLAGKGHEDYQEINGERHAFSDLVEADHALT
AWEVAHA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttagcctgaacaagatttttgcccatgccggtcgcgatctgctgattcgcgag
ctgacgctggacagtcgtaatgtacgcgccggggacctgttcctggcggtgcctggcggt
aaatacgatggccgcgcgcacatcgccgatgccctgcaacgcggcgccgccgccgtggcg
tatgaagtggacggtgccaccgtgctgccgatcaccgacgtgccgttgattcccgtcaag
ggcctggccgcgcaactgtcggacatcgccgggcgtttctacggcgatccgagccgccac
ctgaacctgattggcgtgaccggcaccaacggcaagaccagcgtgacccaactggtcgcc
caggcgcttgacctgttgggccagcactgcggcatcgtcggcaccctgggcaccggtttc
tatggcgcgctgcaaagcggcctgcacaccacgccgaacccgatcgccgtgcaagcgacc
ctggccgacctgaaaaaggccggtgccaaggcggttgccatggaagtgtcgtcccacggt
ttgcaccagggccgcgttgctgcgctggctttcgatgtggcggtgatgaccaacctgtcc
cgcgatcacctggactaccacggcaccatgcaagcctacgccgccgagaaggccaagctg
tttgcctggaacgacctgaagtgccgcgtggtgaacctggatgacgcgttcggccgcgag
ttggctgcccaagacagcgaagcgcgcctgatcagctacagcctggaagactcccgcgcc
tatctgtattgccgcgaagcccaattcaatgacgagggcgtgcgcgccacgttggtgacg
ccgcagggcgagcaccatttgcgcagcaccttgctgggtcgtttcaacctgagcaacgtc
ctcgcggcgatcggtgcgctactcggcctggattacgcgctcgatgaaatcctgcgcgtg
ctgccgaagctggaaggcccggccggtcgcatgcaacgtctgggcggcggttcgcagcct
ctggtggtggtcgattacgcccacaccccggacgcactggaaaaagtcctgctggccctg
cgcccacacgccaagggcaagttgctgtgcctgttcggctgtggcggtgatcgcgatcgc
ggcaagcgtccattgatggccgagattgtcgagcgtctggccgatggcgtgctcgtcacc
gacgacaacccgcgcagcgaagacccgagccagattttcgacgacatccgcgtcggcttc
aaagacccatccaaagccagtttcattgccggtcgcggtgcggccattgcccaattgatc
gccagcgccagcgtcgacgatgtcgtggtactggctggtaaaggtcacgaggactaccag
gaaatcaacggcgagcgccacgctttctccgatctggtcgaggccgatcatgccttgacc
gcctgggaggtcgcccatgcttaa
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