Pseudomonas sp. Y39-6: HXW90_19485
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Entry
HXW90_19485 CDS
T11426
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
psyq Pseudomonas sp. Y39-6
Pathway
psyq01501
beta-Lactam resistance
psyq01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
psyq00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HXW90_19485
01503 Cationic antimicrobial peptide (CAMP) resistance
HXW90_19485
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psyq02000
]
HXW90_19485
01504 Antimicrobial resistance genes [BR:
psyq01504
]
HXW90_19485
Transporters [BR:
psyq02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
HXW90_19485
Antimicrobial resistance genes [BR:
psyq01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HXW90_19485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QPO21595
LinkDB
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Position
4392679..4395900
Genome browser
AA seq
1073 aa
AA seq
DB search
MLGLVKTALQKPYTFIVLAIFICIIGPMAALRTPTDVFPDIGIPVVAVVWQYNGLSPDAM
AGRVIYTYERSLSTTVNDIEHIESQSLPGMGIVKIFFQPGVDIRTANAQVTAVSQTVLKQ
MPPGITPPLILNYSASTVPILQMAFSSPTLSEAKIRDLVQNNIRLPLSALPGLAMPTPMG
GKQRQITLDLDPQALAAKGLSAQDVGNALALQNQIIPVGTAKLGPNEYTILLNNSPKAID
ELNDLPIKTVDGALITIGQVAHVRDGSPPQTNIVRVDGHRAVLMPALKNGSISTLSIIDG
IRQMLPRINETLPPSLKTSLLGDASVFVKQSVGSVAQEGIIAALLTSAMILLFLGSWRST
LIIAASIPLAVLAAIALLAVSGQTLNVMTLGGLALAVGILVDDATVTIENINWHLEQGKA
VKAAILDGAAQIVGPAFVSLLCICIVFVPMFLLQGIAGYLFRPMALAVIFAMASSFILSR
TLVPTLAMYLLKPHTPEPGTGHHPEDAFINHHEGEQHTKPRNAALQSVLNFQQGFERHFS
NIRDTYHGLLTLALGNRKRFIVGFLACVLASFLLLPSLGQDFFPATDAGALALHVRLPLG
TRIEESAAAFDRIEARIREVIPADELDTIVDNIGIPLSGIDMAYSSSGTIGPQDGDIQVS
LKQHHAPTADYVKKLREALPQSFPGSHFAFLPADISSQILNFGAPAPLDVKISGRSDAEN
RAYAVELERRLQHVPGIADLRIQQSTGYPSLQVNVDRLRANGLGITERDVTNSMVASLAG
SSQTAPTFWLNPANGVSYSIVAATPQYRLDSLPALEALPVTGADGQPQILGGVASISRVQ
SPAVVTHYNIEPTLDLYANVQGRDLGGVARDVQKVLDDTASMRPKGATISLHGQIDALHE
AFSGLSVGLLGAVVLIYLLIVVNFQSWVDPFVIITALPAALAGIVWMLFLSGTSLSVPAL
TGAILCMGVATANSILVVSFCRERLAEHGDALKAALEAGYTRFRPVCMTALAMIIGMLPL
ALSEEQNAPLGRAVIGGLILATTATLLFVPVVFSLVHGRQPTRATVGETPHVV
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgctcgggctggtaaagaccgcactgcaaaagccgtacacgtttatcgtgttggccata
ttcatctgcatcatcgggccgatggcggccctgcgaacccccactgatgtattccccgat
atcggcatccccgtcgttgcagtggtctggcagtacaacggcctgtcgccggacgccatg
gccgggcgggtgatctacacctacgaacgctccctgagcaccaccgtcaacgacatcgaa
cacatcgaatcgcaatccctgccgggcatgggcatcgtcaagatcttcttccagcccggc
gtcgacatccgcaccgccaacgcccaggtgacagcggtgtcacaaaccgtgctcaagcaa
atgccccccggcatcacgccgccgctgatcctcaattacagcgcatcgacggtgccgatc
ctgcaaatggcgttctccagcccgacactgtcggaagccaagatccgcgacctggtgcag
aacaatatccgcctgcccctcagcgccctgcccggcctggccatgcccacgcccatgggt
ggcaagcagcggcagatcaccctcgacctcgacccgcaggcgctggccgccaaaggcttg
tcggcgcaggacgtgggcaatgccctggcgttgcaaaaccagatcatcccggtgggcacc
gccaagctcggccccaacgaatacacgatcctgctcaacaacagccccaaggccatcgat
gaactcaacgacctgccgatcaagaccgtcgacggtgcgctgatcaccatcggccaggtg
gcccacgtgcgtgacggttcgccaccgcagaccaacatcgtgcgcgtcgacggccatcgc
gcggtgctgatgccagcgttgaaaaacggcagcatctccaccctgtcgatcatcgacggc
atccgccagatgctgccgcgcatcaacgaaaccctgccgccgtcgctgaagacgtcattg
ctcggcgatgcgtcggtgttcgtcaaacaatcggtgggcagcgtggcccaggaaggcatc
atcgccgcgctgctgaccagcgcgatgatcctgctgttcctcggcagctggcgctcgacg
ctgatcatcgccgcctcgatccccctggcggtgctggcggccatcgcgctgctggcggtc
agcgggcaaaccctcaacgtgatgaccctcggcgggctggcgttggcggtggggattctg
gtggacgacgccacggtgaccatcgaaaacatcaactggcacctggaacagggcaaggcg
gtgaaggctgcgatcctcgacggcgccgcgcagatcgtcggcccggcgttcgtctcgctg
ctgtgcatctgcatcgtgttcgtgccgatgttcttgctgcaaggcatcgccgggtacctg
ttccggccgatggccctggcggtgatcttcgccatggccagctcgttcatcctctcgcgc
accctggtgccgacattggcgatgtacctgctcaagccgcacacgccggaaccgggcacc
ggccaccacccggaagatgcgttcatcaaccaccacgaaggcgagcagcacaccaagcca
cgcaacgcggcgctgcagtcggtgctgaatttccagcagggtttcgagcggcacttctcg
aacatccgcgacacctaccatggcctgctgacgttggccctgggcaatcgcaagcgcttc
atcgtcggctttttagcctgtgtgctcgcctcgtttttgctgctgcccagcctgggccag
gatttcttcccggccaccgacgccggggcgctggcgctgcatgtgcgtttgccgctgggt
acgcggatcgaggaaagcgctgcggcgttcgaccggatcgaggcgcggatacgcgaagtg
atcccggccgacgaactcgacaccatcgtcgacaatatcggcattccgctgagcggcatc
gacatggcctacagcagcagcggcaccatcggcccgcaggacggcgatatccaggtcagc
ctgaaacaacaccacgcgcccaccgccgactacgtgaaaaaactgcgtgaggcgctgccg
caaagtttccctggcagccactttgcgttcctgccagcggacatcagcagccagatcctc
aacttcggcgcgccggcgccactggacgtgaaaatctccgggcgcagcgatgccgaaaac
cgcgcctacgccgtggaactggaacgccgtctgcaacacgtaccgggcatcgccgacctg
cgcatccagcagtccaccggctacccgtcgctgcaagtgaatgtcgaccgcctgcgcgcc
aacggcctgggcatcaccgagcgcgatgtgaccaacagcatggtcgcctccctcgcgggc
agctcgcaaaccgcaccgacgttctggctcaacccggccaacggcgtgtcctattccatc
gtcgccgccaccccgcaataccgcctcgacagcctgccggcgctggaagcactgccagtg
accggtgccgatggtcaaccgcaaatcctcggcggcgtggccagcatctcccgcgtgcaa
agcccggcggtggtgacccactacaacatcgagccgaccctggacctctacgccaacgtg
caaggccgcgacctcggtggcgtggcccgcgacgtgcaaaaagtgctggacgacaccgcg
tccatgcgtcccaaaggcgcgacgatcagcctgcacgggcagatcgatgcgctgcatgaa
gccttcagcggtttgagcgtcggcctgctcggcgcggtggtgctgatctacctgctgatc
gtggtcaacttccagtcgtgggtcgacccgttcgtgatcatcaccgcgctgccggcggca
ttggcggggatcgtgtggatgctgttcctcagcggcacgtcgttgtcggtgccggcgttg
accggggccatcctgtgcatgggcgtggccaccgccaactcgatcctggtggtgagcttc
tgccgggaacgcctggccgaacatggcgatgcgctcaaggccgcactggaagccggctac
acgcgctttcgtccggtgtgcatgaccgccctcgcgatgatcatcggcatgctgccgctg
gccctgtccgaggagcagaacgcgccgctcggccgcgccgtgatcggtggcctgatcctc
gccaccaccgccaccctgttatttgttcccgtggtcttcagcctggtccacggtcgtcag
cctactcgcgcaactgttggagaaacgccccatgtcgtctga
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