Pseudomonas sp. Y39-6: HXW90_23655
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Entry
HXW90_23655 CDS
T11426
Symbol
acnD
Name
(GenBank) Fe/S-dependent 2-methylisocitrate dehydratase AcnD
KO
K20455
2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) [EC:
4.2.1.117
]
Organism
psyq Pseudomonas sp. Y39-6
Pathway
psyq00640
Propanoate metabolism
psyq01100
Metabolic pathways
psyq01120
Microbial metabolism in diverse environments
psyq01200
Carbon metabolism
Module
psyq_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
psyq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
HXW90_23655 (acnD)
Enzymes [BR:
psyq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.117 2-methylcitrate dehydratase (2-methyl-trans-aconitate-forming)
HXW90_23655 (acnD)
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Motif
Pfam:
Aconitase
Aconitase_C
Motif
Other DBs
NCBI-ProteinID:
QPO22331
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Position
complement(5298730..5301324)
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AA seq
864 aa
AA seq
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MNTEFRKSLPGSRLDYFDARAAVDAITPGAYATLPYTSRVLAENLVRRCDPATLNASLSQ
LIERKRDLDFPWFPARVVCHDILGQTALVDLAGLRDAIALQGGDPAQVNPVVPTQLIVDH
SLAVEAGGFDPDAFEKNRAIEDRRNEDRFHFIEWTKKAFKNVDVIPPGNGIMHQINLEKM
SPVIQVRDGVAFPDTCVGTDSHTPHVDALGVIAIGVGGLEAESVMLGRASWMRLPESVGV
ELTGKLQPGITATDMVLALTEFLRQQKVVGAWLEFFGEGASALTLGDRATISNMAPEYGA
TAAMFYIDPQTIAYLKLTGREDAQVALVEQYARQTGLWADDLKGAKYERGLTFDLSSVVR
NMAGPSNPHARVATSDLAAKGISGQWEEVPGQMPDGAVIIAAITSCTNTSNPRNVIAAGL
LARNANKLGLSRKPWVKSSLAPGSKTVAMYLEEAGLGHELEKLGFGVVAFACTTCNGMSG
ALDPVIQQEIIDRDLYATAVLSGNRNFDGRIHPYAKQAFLASPPLVVAYAIAGTIRFDIE
KDVLGLDANGKEIRLKDIWPSDEEIDAVVKASVKPEQFRKVYIPMFAIHEDTGPKVAPLY
EWRPQSTYIRRPPYWEGALAGARPLKGMRPLAVLPDNITTDHLSPSNAIMLDSAAGEYLA
KMGLPEVDFNSYATHRGDHLTAQRATFANPKLFNEMVVENGKVKQGSLARIEPEGKVTRM
WEAIETYMERKQPLIIIAGADYGQGSSRDWAAKGVRLAGVEAIAAEGFERIHRTNLVGMG
VLPLEFLPGTDRHTLKIDGSETYDVVGERTPRAQLTLVINRKNGERVEVPVTCRLDTAEE
VSIYEAGGVLQRFAQDFLESAATA
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgaacactgaatttcgcaaatcgctccccggcagccgcctcgattacttcgacgcccgc
gcggctgtcgatgcaatcacccccggcgcctacgccaccttgccttacacctcccgcgta
ctcgcggaaaacctggtgcgtcgttgcgacccggccaccctcaacgcttccctgagccaa
ctgatcgagcgcaagcgcgacctcgacttcccttggttcccggcgcgggtggtgtgccat
gacatcctcggccagaccgccctggtcgacctcgccggcctgcgcgatgccatcgccctg
caaggcggcgacccggcccaggtcaacccggtggtgccgacccaactgatcgtcgaccac
tccctggccgtcgaagccggtggtttcgacccggacgcgttcgagaaaaaccgcgccatc
gaagaccgccgcaacgaagaccgcttccactttatcgagtggaccaaaaaagccttcaag
aacgtcgacgtgatcccgccgggcaacggcatcatgcaccagatcaacctggagaaaatg
tctccggtgatccaggtgcgtgacggcgtggccttccccgacacctgcgtcggcaccgac
agccacaccccgcacgtggatgccctcggcgtgatcgccatcggcgtcggcggcctcgaa
gccgagagcgtgatgctcggccgcgcctcgtggatgcgcctgccggaaagcgtcggcgtg
gagctgacgggcaagctgcaacccggtatcaccgccaccgacatggtgctggcgctgacc
gagttcctgcgtcaacagaaagtggtgggcgcatggctcgagttcttcggcgaaggtgca
tcggcactgaccctgggcgaccgcgcgaccatctccaacatggccccggaatacggcgcc
accgcggcgatgttctacatcgacccgcagaccatcgcctacctgaaactcactggccgt
gaagacgcacaagtcgccctggtcgagcagtacgctcgccagaccggcctgtgggccgac
gacctcaagggcgcgaaatacgagcgcggcttgaccttcgacctgtccagcgtcgtgcgc
aacatggccggcccgagcaacccgcacgcccgtgtcgccaccagcgacctcgccgccaaa
ggcatctccggccagtgggaagaagtaccggggcaaatgcccgacggtgcggtcatcatt
gccgcgatcaccagttgcaccaacaccagcaacccgcgcaacgtgatcgccgccggcctc
ctggcgcgcaacgccaacaagctggggctgagccgcaagccgtgggtcaaatcgtccctg
gcgcccggttcgaaaaccgtggccatgtacctcgaagaagccggccttgggcacgaactg
gaaaaactcggtttcggcgtggtggcctttgcctgcaccacctgcaacggtatgtccggt
gcgctcgacccggtgatccagcaagagatcattgaccgcgacctgtacgccaccgccgtg
ttgtcgggtaaccgcaacttcgacgggcgtatccacccgtatgccaagcaagcgttcctg
gcttcgccgccgctggtggtggcctatgcgattgccggcaccatccgtttcgacatcgag
aaggacgtactgggcctcgacgccaacggcaaggaaatccgtctgaaagacatctggccg
agcgacgaagaaatcgacgcggtggtcaaggcgtcggtcaagccagagcagttccgcaaa
gtgtatatcccgatgttcgcgatccacgaagacaccggcccgaaagtcgcgccgttgtat
gagtggcgcccgcaaagcacctatatccgccgtccgccgtactgggaaggtgcgctggcc
ggtgcgcggccgctcaagggtatgcgcccgctggcagtgctgccggacaacatcaccacc
gaccacctgtcgccgtccaacgcgatcatgctcgacagcgccgccggcgaatacctggcg
aaaatgggcctgccggaagtcgacttcaactcctacgcgacccaccgcggcgaccacctg
accgcgcaacgcgcgaccttcgccaacccgaaactgttcaacgaaatggtcgtcgagaac
ggcaaggtcaagcagggttccctggcgcgcatcgagccggaaggcaaggtcacacgcatg
tgggaagccatcgaaacctacatggagcgcaagcagccgctgatcatcatcgctggcgcc
gactacggtcagggttcgtcccgcgactgggcggccaagggcgtgcgcctggcgggtgtg
gaagcgattgccgccgaaggtttcgaacgcattcaccgcaccaacctggtgggcatgggc
gtgttgccgctggagttcctgccgggcaccgaccgtcacacgttgaagatcgacggcagc
gaaacctatgacgtggtcggcgaacgcaccccgcgcgcgcagttgaccctggtgatcaac
cgcaagaatggcgaacgtgtcgaagtgccggtgacctgccgcctggacaccgctgaagaa
gtgtcgatctacgaggcgggcggcgtgttgcaacgttttgcccaggacttcctggaatcg
gcggcgaccgcctga
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