Psychrobacter sp. YP14: DLE54_04445
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Entry
DLE54_04445 CDS
T05488
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
psyy
Psychrobacter sp. YP14
Pathway
psyy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psyy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DLE54_04445 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psyy03400
]
DLE54_04445 (nth)
Enzymes [BR:
psyy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DLE54_04445 (nth)
DNA repair and recombination proteins [BR:
psyy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DLE54_04445 (nth)
Prokaryotic type
DLE54_04445 (nth)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
Ogg-HhH
EndIII_4Fe-2S
SdiA-regulated
Motif
Other DBs
NCBI-ProteinID:
AWT48855
LinkDB
All DBs
Position
complement(1025459..1026154)
Genome browser
AA seq
231 aa
AA seq
DB search
MSKVVKHKTADTPPSRRLPNRDVRPFFEKLAAAIDEPVTELEYSSNFELLIAVILSAQAT
DVSVNIATRKLFAVANTPEAIYALGEEGLKQYIKTIGLYNSKAKNVIKACKDLVDKHNSV
VPDNRKDLEALAGVGRKTANVVLNTAFGQPTMAVDTHIFRVSNRTGLATGKTVLAVEHKL
IERVPDDFILDAHHYLILHGRYTCQARTPKCGACPVYTECMFKDKQLFAEM
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagtggttaaacacaaaacagccgataccccgccatcaagacgcctacccaat
cgcgatgtacgccctttttttgagaaactggccgcagccatcgatgagccggtcacagag
cttgaatacagcagtaactttgagctgcttatcgcggttatcttatcggcgcaagctacc
gatgtcagtgtcaatattgccacccgcaagctgtttgcagtggccaatacccccgaggca
atctatgcgctgggtgaagagggcttgaaacagtacatcaaaaccattggcctgtataat
tcaaaagccaaaaatgtgattaaggcctgtaaagacttagtcgataaacacaacagcgtg
gtgcctgataaccgcaaagacttagaggcgctagcaggtgtcggccgaaaaaccgccaac
gtggtattaaataccgccttcggccagcccacaatggcagtcgatacccatatctttcga
gtcagcaatcgcacgggacttgccactggcaaaacggttctggcagtcgaacataagctg
attgaacgtgtccctgatgattttatactcgatgcccatcattatttgattttgcacggc
cgctacacctgtcaagcacgcactccaaaatgcggcgcttgccctgtttatacagagtgt
atgttcaaagacaaacaactatttgctgagatgtga
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