Psychrobacter sp. YP14: DLE54_04490
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Entry
DLE54_04490 CDS
T05488
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
psyy
Psychrobacter sp. YP14
Pathway
psyy01501
beta-Lactam resistance
psyy01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
psyy00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DLE54_04490
01503 Cationic antimicrobial peptide (CAMP) resistance
DLE54_04490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psyy03036
]
DLE54_04490
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psyy02000
]
DLE54_04490
01504 Antimicrobial resistance genes [BR:
psyy01504
]
DLE54_04490
Chromosome and associated proteins [BR:
psyy03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
DLE54_04490
Transporters [BR:
psyy02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
DLE54_04490
Antimicrobial resistance genes [BR:
psyy01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
DLE54_04490
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_RND
RND-MFP_C
BSH_RND
HH_MFP_RND
BSH_CusB
HH_EMRA
BSH_CzcB
YknX_C
HH_AAEA_pHBA
HH_YBHG
Biotin_lipoyl
Tuftelin_like
Beta-barrel_RND_2
HmpF
AAA_13
HH_AprE
SmaI
Motif
Other DBs
NCBI-ProteinID:
AWT48864
LinkDB
All DBs
Position
complement(1037124..1038533)
Genome browser
AA seq
469 aa
AA seq
DB search
MKHSHLFIAISLAVSGLFIAGCDKKDEAADAAASQQQMPPAVVNVIPVQFQTVPLVQEFS
GRTAAYEVADIRPQVTGVVDEILFPQGRMVQKGQPLYRISPENYQSSAGANQAAVQQAQA
NVETAKASYNNALANIESQKALLEQAQADVRRLKPLVAQQAISEQQYEQAMTQLKTAQAG
LNSAQAAAQQAQANIASSQAAVATAQAQLSGSQLDISRTIVRSPISGVTERSSVTAGALV
NANQANPLVTVSKIDPIYVDISQSSSELLKLKQQQAKGSIQAGTSTVELVFEDGSTYPVR
GQLSLAEAKVEQDTGAVTLRAIFKNDNYMLLPGMYVKARLIQGLINNAVLLPQSAIMRTP
KGETQVYIVDKNNKIQVRNVTIEGTYQGQWIVTDGLQSGDNVVAIGGAKVKPEQEVVSKP
YVPTSSEGGAAPQAGGAPNQGQAPAAKSEMPKGPVAPQAQKSPEDDAAK
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgaaacactcgcaccttttcattgctattagcttagctgtatctggtttatttattgcc
ggttgcgacaaaaaagatgaggctgcagatgctgccgcttctcagcagcaaatgccgccc
gctgtggtcaatgtcattcctgtacaattccaaacagttcctttagttcaagaattctcg
ggtcgtacagcggcttatgaggttgccgatatccgccctcaagttactggggtggtggat
gaaatcttatttccgcaaggccgcatggtccaaaagggtcagcctctatatagaatcagc
ccagaaaactaccaatctagcgccggcgccaatcaagccgctgtacaacaggctcaggcc
aatgtagagactgctaaagcaagctataacaatgctttggccaatattgagtcacaaaaa
gcattgttagaacaagctcaagctgatgtgcgtcgccttaaacccttggttgctcagcaa
gccatttcagagcagcagtacgagcaagccatgactcagctaaaaacagcacaagcaggt
ctaaatagtgctcaggcggcggcacaacaagcccaagccaatatcgcaagctcacaagct
gcggtagccacagcgcaggctcagttatcgggcagtcaattagatatcagccgtaccatt
gtacgctcgcccatttcaggcgtcactgagcgctcaagcgtcaccgctggtgccttggta
aacgccaaccaagccaatcctttggttactgtctcaaaaatcgatccgatttatgttgat
atcagccagtcctctagcgagctattaaagctaaaacaacagcaagctaaaggctcaata
caagctggtaccagcaccgttgagttggtatttgaagatggatcgacgtatccggtgcgt
ggccaattgtcactggctgaagccaaggttgagcaagataccggggcggtcaccctgcgt
gctattttcaaaaatgataactacatgctgctgccaggtatgtatgtaaaagcccgatta
attcaaggcttgattaataacgcggtgttattgccacaaagcgctattatgcgtacgcca
aagggtgaaacccaggtatatattgttgataaaaacaataagattcaggttcgtaatgtc
actatcgaaggcacttatcaaggccagtggattgtgactgacggcctgcaatcaggggat
aatgtggtggccattggtggtgccaaagttaagcctgaacaagaggtggtcagtaagcct
tatgtaccgacctctagcgaaggcggcgcagcccctcaagcaggtggcgcacctaaccaa
gggcaagcccccgccgccaaatctgaaatgccaaaaggccctgtagcccctcaagcgcaa
aagtcgcctgaagatgacgctgcaaaataa
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