Primulina tabacum: 142505744
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Entry
142505744 CDS
T11246
Name
(RefSeq) RING-box protein 1a
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
ptab Primulina tabacum
Pathway
ptab03420
Nucleotide excision repair
ptab04120
Ubiquitin mediated proteolysis
ptab04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
142505744
04120 Ubiquitin mediated proteolysis
142505744
09124 Replication and repair
03420 Nucleotide excision repair
142505744
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptab04121
]
142505744
03400 DNA repair and recombination proteins [BR:
ptab03400
]
142505744
Enzymes [BR:
ptab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
142505744
Ubiquitin system [BR:
ptab04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
142505744
Multi subunit type E3
SCF complex
Ring finger protein
142505744
Cul2 complex
142505744
Cul3 complex
142505744
Cul4 complex
142505744
Cul7 complex
142505744
Cul8 complex
142505744
Cul9 complex
142505744
DNA repair and recombination proteins [BR:
ptab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
142505744
TCR (transcription coupled repair) factors
Cul4-CSA complex
142505744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
DUF8003
Motif
Other DBs
NCBI-GeneID:
142505744
NCBI-ProteinID:
XP_075474960
LinkDB
All DBs
Position
10:9176287..9179178
Genome browser
AA seq
127 aa
AA seq
DB search
MASLDTDVNMIPAGEGSSDAGPSNAAPTSAPSLSAKKAKRFEIKKWNAVALWAWDIVVDN
CAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEW
EFQKYGH
NT seq
384 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgttggacaccgacgtgaatatgatccccgccggagaggggtcttccgatgct
gggccctccaacgctgctcccacgtcagcgccgtcgctatccgccaagaaagccaagcga
tttgagatcaagaagtggaacgccgtcgctctctgggcttgggatattgtggttgataat
tgtgctatttgcaggaatcatattatggatctttgcatcgagtgtcaggctaatcaagct
agtgcgaccagtgaggagtgcacggttgcttggggtgtttgcaatcatgccttccatttc
cactgcatcagcagatggctcaagactcgccaagtttgccccttggacaatagtgagtgg
gagtttcagaagtatggtcactaa
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