Primulina tabacum: 142532915
Help
Entry
142532915 CDS
T11246
Name
(RefSeq) sm-like protein LSM3A
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
ptab Primulina tabacum
Pathway
ptab03018
RNA degradation
ptab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
142532915
09123 Folding, sorting and degradation
03018 RNA degradation
142532915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptab03019
]
142532915
03041 Spliceosome [BR:
ptab03041
]
142532915
Messenger RNA biogenesis [BR:
ptab03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
142532915
mRNA degradation factors
5'-3' decay
Lsm complex
142532915
Spliceosome [BR:
ptab03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
142532915
Complex C
U2 snRNP components
142532915
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
U6-snRNA_bdg
TIG_SUH
Motif
Other DBs
NCBI-GeneID:
142532915
NCBI-ProteinID:
XP_075495578
LinkDB
All DBs
Position
18:31187955..31189977
Genome browser
AA seq
97 aa
AA seq
DB search
MGSEEEITVKEPLDLIRLSLDERIYVKLRHDRELRGKLHAYDQHLNMILGDVEEIVTTVE
IDDETYEEIVRTTRRMVPYLFVRGDGVILVSPPLRTA
NT seq
294 nt
NT seq
+upstream
nt +downstream
nt
atggggagcgaagaggagattacagtgaaagagccattggacctcatacgtctcagtctc
gacgagcgtatctacgtcaaacttcgccacgatcgcgagcttcgcggcaagcttcatgcc
tatgatcagcatttaaatatgatcctgggagatgttgaagagattgttactactgtggag
attgatgatgaaacatacgaggagattgtgaggacaaccaggcgtatggtaccatattta
tttgtcagaggagatggtgtcattttggtttcacctccattgcgaacggcctga
DBGET
integrated database retrieval system