KEGG   Primulina tabacum: 142532915
Entry
142532915         CDS       T11246                                 
Name
(RefSeq) sm-like protein LSM3A
  KO
K12622  U6 snRNA-associated Sm-like protein LSm3
Organism
ptab  Primulina tabacum
Pathway
ptab03018  RNA degradation
ptab03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ptab00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    142532915
  09123 Folding, sorting and degradation
   03018 RNA degradation
    142532915
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptab03019]
    142532915
   03041 Spliceosome [BR:ptab03041]
    142532915
Messenger RNA biogenesis [BR:ptab03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     142532915
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     142532915
Spliceosome [BR:ptab03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    142532915
 Complex C
  U2 snRNP components
    142532915
SSDB
Motif
Pfam: LSM U6-snRNA_bdg TIG_SUH
Other DBs
NCBI-GeneID: 142532915
NCBI-ProteinID: XP_075495578
LinkDB
Position
18:31187955..31189977
AA seq 97 aa
MGSEEEITVKEPLDLIRLSLDERIYVKLRHDRELRGKLHAYDQHLNMILGDVEEIVTTVE
IDDETYEEIVRTTRRMVPYLFVRGDGVILVSPPLRTA
NT seq 294 nt   +upstreamnt  +downstreamnt
atggggagcgaagaggagattacagtgaaagagccattggacctcatacgtctcagtctc
gacgagcgtatctacgtcaaacttcgccacgatcgcgagcttcgcggcaagcttcatgcc
tatgatcagcatttaaatatgatcctgggagatgttgaagagattgttactactgtggag
attgatgatgaaacatacgaggagattgtgaggacaaccaggcgtatggtaccatattta
tttgtcagaggagatggtgtcattttggtttcacctccattgcgaacggcctga

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