KEGG   Primulina tabacum: 142540855
Entry
142540855         CDS       T11246                                 
Name
(RefSeq) putative DNA glycosylase At3g47830
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
ptab  Primulina tabacum
Pathway
ptab03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ptab00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    142540855
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ptab03400]
    142540855
Enzymes [BR:ptab01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     142540855
DNA repair and recombination proteins [BR:ptab03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     142540855
 Prokaryotic type
     142540855
SSDB
Motif
Pfam: HhH-GPD USP47_C
Other DBs
NCBI-GeneID: 142540855
NCBI-ProteinID: XP_075503396
LinkDB
Position
3:complement(16803846..16806300)
AA seq 290 aa
MQRSRERKQISSSLKPLRTTASCRSQPAEDPYSDHPQPTFEECRSVRDDLLSLHGFPQEF
VKYREQRLQMGLRESHILPNGGECGEKESVLDGLIRTVLSQNTTEVNSERAFGNLKCAFP
TWEQVLAAESKCVEDAIRCGGLAPTKSSCIKNLLSCLLQKKGNLCMEYLRELSIEEIKAE
LSHFKGIGPKTVACVLMFQLQKDDFPVDTHVFQISKTMGWVPASADIKKTYLHLNQRIPD
ELKFDLNCLLYTHGKACKRCSNRNVGGLKKETGDRHCPLLAYRNHRAAEK
NT seq 873 nt   +upstreamnt  +downstreamnt
atgcagaggagccgcgagagaaaacaaatcagctcctccctcaaaccactcaggaccacc
gcgagctgccgcagtcagcccgccgaagacccgtattcggatcatccgcaacccaccttc
gaggaatgccgctccgtgcgagacgatcttttatctctccacggatttccccaggagttc
gttaaatatcgtgagcaaagattacagatgggtttgagggagtctcatattttacctaat
ggcggagaatgtggtgaaaaggagagtgttttggatggtttgattagaactgtactgtca
cagaacactaccgaagttaattcggaaagggcttttggtaatcttaaatgtgctttccct
acctgggaacaggttcttgcagctgagtcaaaatgcgttgaggatgctataagatgtgga
ggtttagcacctacaaagtcttcttgtatcaagaatttattgagttgcttgcttcagaag
aaaggaaacttgtgcatggagtacttgagagaattgtcaatcgaagagatcaaggcagaa
ctctctcatttcaaaggaataggtcccaagacggtagcatgtgttttgatgtttcagttg
caaaaagatgatttccccgtggacacacatgtttttcagatttcaaagacaatgggttgg
gtgccagcttctgcagatatcaagaagacatatctccatctcaatcaacgaatcccagat
gaactgaaattcgacctcaactgccttttgtacactcacggcaaggcttgtaagagatgc
tcaaataggaacgtaggtgggctcaaaaaggaaactggcgacaggcattgccctttatta
gcttatcgcaaccatcgggcagctgaaaagtaa

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