Primulina tabacum: 142553667
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Entry
142553667 CDS
T11246
Name
(RefSeq) transcription factor PIF1-like isoform X1
KO
K16189
phytochrome-interacting factor
Organism
ptab Primulina tabacum
Pathway
ptab04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
142553667
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptab03000
]
142553667
Transcription factors [BR:
ptab03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
142553667
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
Motif
Other DBs
NCBI-GeneID:
142553667
NCBI-ProteinID:
XP_075520208
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Position
8:complement(9505949..9510080)
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AA seq
530 aa
AA seq
DB search
MNHHVPGFQELEEECSILDSSGFSRPKRLLPTGEEDIMELLWRNGQVVVQRSTKRGGEIE
VPAEHLTVRGIRSTAEEQHLFMQEDEMASWLQYPIDDSSFDRDLYADLMDSAAPPPPPPP
FQAPVTAIAPPRSVPEIRPHPAPSPPIALQAQKPEFSPRFQNFVHFSRHPCRQSIEPISK
PLATVARESTVVESNETPAVGRESRTSLVDFRTQTNTDRGAAALNAPGTSAGKLAAGTYE
LTVSSSPGGSGSSFSASRKPHRQTRKRTPAGERKRKIREADDNECRSEENDYEEDETKRQ
GHLLTASSSKRSRAAEVHNLSERRRRDRINEKMKALQQLIPRCNKTDKASMLDEAIEYLK
SLQLQVQMMSSMGCGMVPVMYPGMQRFMPAMGMGMGMGMGMGMDMGMNRPMLPYPSMQLP
GSGQPNQASPAPHMGAGFHIPTFHLPPVLPVPDSSRIQAVSSMADPMLNSLVSPDPNQPR
MPNFVYPYQQFPAGLQQASQLPLPQNQAAAQPNTSKQTGNMENQPSAGRK
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaccacgttccaggtttccaggagttagaagaggagtgttccattctggactct
tcaggattttcaagacccaaaagattattgcccacaggtgaggaggatatcatggaactt
ctgtggcggaatggccaagttgtggtgcagagatcaaccaagagaggcggagagattgag
gttccagcggagcatttgacagtgagggggatccgatcgactgcggaggagcagcatctg
tttatgcaagaggatgagatggcatcttggcttcagtacccgatcgatgactcctcattt
gatcgggatttgtacgcagatctaatggactctgctgctcctcctcctcctcctccgcct
tttcaggctcctgtcactgccattgctccacctcgttccgtgccggagatccgacctcat
ccggcgccgtcgcctcccattgcactccaagctcagaagccggaattttccccacgcttc
cagaatttcgtccatttctcgaggcatccgtgcaggcagagtatcgagccaatttcgaaa
ccgttggcaacggtagcgagggaatccacggtggtggagtcaaatgagacgccggctgta
gggcgagaatctaggacttctctggtggatttcaggacacagacgaacacagaccgtggt
gctgcggcgcttaatgcccctggtacgtccgctgggaaattggcagccggtacatatgag
cttactgtgtcgtcatctcccggcggttccggatccagtttcagcgccagccgtaagccg
catcgccagaccaggaagcggacgccggcgggggagcggaagcggaaaatcagagaagcc
gatgacaacgagtgtcggagtgaggagaatgattatgaagaagatgaaaccaaaagacaa
gggcatctgttaactgcctcctcctcgaagagatctcgtgccgctgaagttcacaatctt
tctgaaaggaggcgtcgagacaggattaatgaaaagatgaaggctttgcaacaactcata
cctcgatgcaacaagacggacaaagcttcgatgttggacgaggcgattgagtacttgaaa
tcactacaactccaagttcagatgatgtcatccatgggatgtggcatggttcctgtaatg
taccctggtatgcaaagattcatgccggcaatgggaatgggaatgggaatggggatgggg
atggggatggatatgggcatgaaccggccaatgctgccgtatccatctatgcagcttcca
ggttccgggcagccgaatcaggcgtcgccagcaccacatatgggagccggatttcacatt
ccaacatttcacctgccaccagtgcttcctgtacctgattcatcaagaattcaggctgtc
tctagcatggctgatcctatgctaaactcactcgtatcccccgatcctaatcagccacga
atgcccaactttgtgtatccataccaacagtttcctgctggtcttcaacaggcttcgcag
ttgcctctaccacagaatcaagcagcggcacaacctaacaccagcaaacaaacaggcaac
atggaaaatcaaccatctgctggtaggaaatga
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