Parvicella tangerina: CRYO30217_00109
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Entry
CRYO30217_00109 CDS
T08372
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
ptan
Parvicella tangerina
Pathway
ptan03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ptan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CRYO30217_00109 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptan03400
]
CRYO30217_00109 (nth)
Enzymes [BR:
ptan01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CRYO30217_00109 (nth)
DNA repair and recombination proteins [BR:
ptan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CRYO30217_00109 (nth)
Prokaryotic type
CRYO30217_00109 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
Ogg-HhH
Transposase_20
H2TH_5
Motif
Other DBs
NCBI-ProteinID:
CAG5076445
UniProt:
A0A916NPE0
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All DBs
Position
1:complement(116961..117605)
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AA seq
214 aa
AA seq
DB search
MTKSEKVQYVIDELERLYPEAPIPLDHKDPYTLLIAVLLSAQCTDARVNKITPLLFKKAD
NPFEMVKLDVEEIQQIIRPCGLSPRKSKAIYELSEILIEKYDGEVPENMELLEELPGVGH
KTASVVMSQAFGVPAFPVDTHIHRLMYRWGFTNGKSVEQTEKDAKRLFPKEIWNKLHLQI
IFYGREYSPARSPKKDVDFITMKIGRKSVIKDYK
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatcagaaaaagtacaatacgtaatagatgagttggagcgtctctatcctgag
gcgcctatacctttggatcacaaggatccttacacattactaattgcggtacttttgtct
gcgcaatgtacggatgcacgtgtcaataaaatcactccactgctgtttaagaaggctgac
aacccctttgaaatggtaaagctggatgtagaagagattcagcagatcattcgtccatgc
ggtttatctccgaggaagtctaaagccatttacgagctctcagagatccttattgaaaaa
tatgatggagaggtgccagaaaacatggaactcctcgaagaattacctggagtgggccac
aaaacggcttctgtagtcatgagtcaggcttttggtgtgccagcatttcctgtggacacc
catattcaccgtttgatgtatcgatgggggtttacaaacggaaaaagcgtagagcaaacc
gaaaaggatgcgaaacgattgttccctaaagagatttggaataaacttcacttacaaatc
atcttctacgggagggagtactctcctgcaagaagtcccaaaaaagacgtggactttatc
acgatgaagattgggaggaaaagtgtgattaaagattataagtag
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