Candidatus Phycorickettsia trachydisci: phytr_5830
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Entry
phytr_5830 CDS
T05372
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
ptc
Candidatus Phycorickettsia trachydisci
Pathway
ptc00300
Lysine biosynthesis
ptc00550
Peptidoglycan biosynthesis
ptc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ptc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
phytr_5830
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
phytr_5830
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ptc01011
]
phytr_5830
Enzymes [BR:
ptc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
phytr_5830
Peptidoglycan biosynthesis and degradation proteins [BR:
ptc01011
]
Precursor biosynthesis
Amino acid ligase
phytr_5830
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
AVP87526
UniProt:
A0A2P1P8E2
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All DBs
Position
652302..653744
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AA seq
480 aa
AA seq
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MPYKKYDYILSQNPSGICIDSRIVSEGEVFFVPSYKKYDPVNYINQALDKGAKLVVTDHP
GFQNKEKVIYVENVTRALWYCADKFYSNLPRHKIAITGTNGKTSTTDYVRQIFILLGQKA
GSIGTLGAISNVNLDNSILNLAFLTSNDLITNYKILSQLKEREADYACLEGSSLGIHQGR
LGQIKFDCAAFTSFSQDHLDYHHTLSNYFQAKLDLFRNNLTPTHHIFISEQVCNIADEMN
FDLPFKFEIIGESAFCDARIDFKYHDVNGQLIQFVYHNHEYAFETDITTKVQGYNLVFAA
LLVHKCGFSLKEIMKVIPHVKPVAGRMQKIPDPKNFRHIFVDFAHDPYSLQNILLELQKL
KNSDSARIFCIFGCGGDRDKLKRPIMGKVASELADQVIVTDDNPRSENPQLIRSDIIHGI
TKGNYIEIADRKIAIKETLKIMNINDILLVTGKGHEDYQIYGNHKMPFSDVEIIEQCLSE
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
ttgccatataaaaaatacgattatatcttatcacaaaatccttccggaatttgtattgac
tcacggatagtcagtgaaggtgaggtcttttttgtgccttcttataaaaaatacgacccc
gtcaactacatcaatcaggctttagataaaggagcaaaacttgttgttacagatcatcca
ggattccaaaataaagaaaaagtaatctacgttgaaaacgtaacaagagctctttggtac
tgcgcagataagttttactccaatttaccacgacataaaattgctataacgggaacaaat
ggcaagacctctactacagattatgtaagacaaatattcattttgttaggacaaaaagct
ggaagtattggaacgcttggcgcaatctccaacgttaatcttgataactctatcttaaat
cttgcattcttaacctctaatgatctaattacaaattataagatattatctcaactcaaa
gaacgggaagctgattatgcctgcttagaagggtcaagcttgggcatacatcaaggacga
ttagggcaaattaaatttgactgtgctgcgttcacctcgttttcccaagaccatttagat
tatcatcatactttatcaaattactttcaggccaaattagatctttttagaaataacctt
actcctacacatcatatttttatatctgaacaagtatgtaacatagcagatgagatgaat
tttgacttaccttttaaatttgagattataggagagtctgcattttgcgatgctcgaata
gattttaaatatcatgatgttaatggacagctaatacaatttgtgtatcataatcacgaa
tatgcatttgagactgatataacaacaaaagttcaaggctataatttagtctttgcagcc
ttgttagtccataaatgtggttttagcttaaaagagataatgaaggttattccccatgta
aaacctgtggcaggtagaatgcaaaaaattcctgatcctaaaaatttcagacatattttt
gtagattttgcacatgacccgtattctcttcaaaatatccttttagagcttcaaaaatta
aaaaattcagattcggcaagaattttttgtatattcggttgtggaggcgatagggataaa
ctcaaaagacctataatgggtaaagttgcttctgagttagcagatcaagtgattgttaca
gacgataatccaagatccgaaaatccacaacttattagatctgatattattcacggtatt
accaaaggtaattatatagaaattgcggatcgcaaaattgctataaaagaaacattgaaa
ataatgaatattaatgacatactgttagttactggcaaaggtcatgaagattatcaaatt
tatggtaatcataagatgccctttagtgatgtagaaattatagaacagtgtttatcagaa
taa
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