Candidatus Phycorickettsia trachydisci: phytr_9500
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Entry
phytr_9500 CDS
T05372
Name
(GenBank) organic radical activating protein
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
ptc
Candidatus Phycorickettsia trachydisci
Pathway
ptc00790
Folate biosynthesis
ptc01100
Metabolic pathways
Module
ptc_M00988
PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Brite
KEGG Orthology (KO) [BR:
ptc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
phytr_9500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ptc03016
]
phytr_9500
Enzymes [BR:
ptc01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
phytr_9500
Transfer RNA biogenesis [BR:
ptc03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
phytr_9500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
PUL
Topo_VI_alpha
Motif
Other DBs
NCBI-ProteinID:
AVP87878
UniProt:
A0A2P1P9D0
LinkDB
All DBs
Position
complement(1069577..1070230)
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AA seq
217 aa
AA seq
DB search
MFGNNPIRGLEKGSGDELFVQDIFLTIQGEGPFVGHAAVFMRLGGCNLACKFCDTEFESF
TQIPIDKILEKILSFQTKLVVITGGEPMRQPIEKFCQLLLDNNLKVQIETNGTIFRNLPE
KVHIVCSPKAPNGKYYKLREDMLRRINALKFLISTKFEAYKDVPDVGQSGYNIPTYVQPM
DEYDAELNKQNTQHAIKLAQKFGYILSVQTHKFIGIP
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgttcggtaataaccctatcagaggtcttgaaaaaggctcgggagatgagctttttgtg
caagatatattcttaacaattcaaggagaagggccatttgttggccacgcagcagtattt
atgcgtcttggaggatgtaatttagcctgtaaattttgcgacactgagtttgaaagtttt
acgcaaataccgatagataaaatattagaaaagattttgtcctttcaaacaaaactagtt
gttattactggaggagagccaatgcgccagcctattgaaaaattttgccaattactctta
gataacaacttaaaagttcagattgaaactaatggcacaatattcagaaaccttcctgaa
aaagttcatatagtatgctcacctaaggcccctaatggcaagtattataagctaagagaa
gatatgctgagacgcataaatgctctaaaatttctgatttctactaagtttgaagcttat
aaagatgtgcccgatgtaggacagagcggttataatattcccacatacgttcagcctatg
gatgagtatgatgccgagcttaataaacaaaatactcagcatgctattaaattagctcaa
aaatttggctatatcctaagcgtccaaacgcataaatttataggtataccttaa
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