Pyrenophora teres: PTT_13197
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Entry
PTT_13197 CDS
T01613
Name
(GenBank) hypothetical protein
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
pte
Pyrenophora teres
Pathway
pte03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pte00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PTT_13197
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pte03041
]
PTT_13197
Spliceosome [BR:
pte03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
PTT_13197
Complex C
U5 SnRNP specific factors
PTT_13197
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
MMR_HSR1
EFL1
Ras
DUF5505
Motif
Other DBs
NCBI-ProteinID:
EFQ90251
UniProt:
E3RVK0
LinkDB
All DBs
Position
Unknown
AA seq
993 aa
AA seq
DB search
MDDLYDEFGNFIGEAESDEDVQSSGEAADAYVLDDEEEAEANDQQLMEIDEGPSNAVVLH
EDKQYYPSASDVYGPDVEVLVQEEDMQSLAQPIIAPVVQKKFAIQETDLPPVHHSRELLT
DLMNFPDQIRNIAIAGHLHHGKTAFMDMLVMETHDIQDRLDYKKGKKREEQLRYTDVHVL
ERERGLSIKAAPMSLVLQNTKLKSHLFNILDTPGHVNFADEVAASLRLVDGVVLVVDVVE
GVQVNTEQIIKHAVLEDLPITLVVNKMDRLILELKLPPSDAYFKIKHVIEEVNTVIENTI
PGRGESRRVSPEKGNVAFACSSMRWCFTIQSFAKMYSDYYPGPSKLPGFGVPMKGLDIEK
FAMRLWGDIFYNPGSRKFSRKRQEEGSQRSFVHWILEPVYKIYSHTLSQSPDELKDTLEA
LGIRLKPSEYKADAKELMRLVCQQYFGPSLGFVDMITQHIPSPEEGAKRLLERHYTGPLD
TKTAEAMQKCDQNGPLVVHVTKLFNATDAKSFTALGRVLSGTATSPQSVRVLGEGYTIED
EEDMVVATVTDTWIAQSRYNIPVSGVPAGNWVLLGGVDNSIVKTATIVATKLPDDEDAYI
FRPIRHFFESVFKVAVEPINPSELPKMLDGLRKINKSYPLISTKVEESGEHVVLGTGELY
MDCVLHDLRRLYADMEIKVSDPVTRFCETVVEMSAIKCYALTPNKKNKITMIAEPLDPGI
AEDIEAGKVSIKDPVRVVGKFFEENYGYDLLASRNIWAFGPDDMGPNILQNDTLPAEVDG
KTLRTVRDTLRQGFSWATREGPLCEEPIRNTKFRITDVELASEAIFRGGGQIIPTSRRAC
YSSFLMASPRLMEPVYSCSMVGPSDTKSSLYTVLARRRGHVLQDGPIAGTPLYNVRGLIP
VIDSFGFETDLRIHTQGQVSLSLVFDRWSIVPGDPLDKEVTTRPLEPATAQQLARDFVLK
TRRRKGLAEDVTISKFLEPELFRSLKESGVLDG
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atggacgacctctacgacgagtttggtaatttcattggcgaagcagagtccgatgaagat
gtccagagttccggcgaggcagccgacgcctatgtcctcgacgatgaggaagaggccgag
gccaacgaccagcagcttatggagatagacgaagggccgtcgaatgctgtagttctccac
gaggacaagcagtactacccctcagcatctgatgtatacggtcccgatgtcgaagtgctg
gtgcaagaggaagacatgcaatcgctggcgcagcccattattgcaccagtagtccagaag
aagtttgcaatccaggagacggatctgccgcctgtacaccactcgagggagcttctgacc
gatctcatgaactttccagaccagatacggaacattgccattgctggacatttgcatcat
ggaaagacggcattcatggacatgctggtcatggagacgcacgatattcaggatcgtctg
gactacaagaagggaaagaagcgggaggaacagctgcgctacacagacgtacacgtgctc
gaacgcgaacgaggcctttccatcaaggctgccccgatgagcctggtgctccagaacacg
aagctaaagtcgcatcttttcaacatcctcgacacacccggacacgtaaactttgcggac
gaagtagcggcctcgttgcgcttggtagacggagtagtcctggttgtggacgtggttgag
ggcgtccaggtcaacacagagcaaatcatcaagcatgcggtgctggaagatctccccatc
acacttgtagtaaacaagatggaccgattgattttggagctaaagttaccaccgagcgac
gcatacttcaagatcaagcacgtaatcgaggaggtcaacactgtcattgagaacactatt
ccaggccgcggcgaaagtagacgggtaagccctgagaaaggcaacgtcgcattcgcctgc
tccagcatgcgatggtgtttcacgattcagtcattcgctaagatgtattctgattactac
cccggtccctcgaagcttccaggattcggcgttccaatgaaggggttggatatcgagaaa
ttcgccatgcgactttggggtgacattttctacaatcctggaagccggaaattcagtcgc
aagcgccaggaggaaggttcacaacgatcctttgtacactggattttggagcctgtctac
aagatctactcgcatactctcagccagagcccagacgaactcaaagacacactcgaggct
ctgggcataaggctgaagccctctgaatacaaagcagacgcaaaagagctaatgcgctta
gtatgccaacagtatttcggcccctccctaggattcgtagacatgattacacagcatatt
ccatcacctgaagagggcgcgaagcgactgttggaaagacactacactggacctttggac
acaaagaccgccgaggcaatgcagaagtgcgatcagaatggtccattggtcgtgcacgta
acgaagctcttcaacgcgacagacgcaaagtcctttaccgccctaggccgagtactgagt
ggtaccgcgacttcgccacaatcggtgcgtgtgctaggagaaggttatacgattgaggat
gaggaagacatggttgttgcaaccgtaacggatacatggatagcccagtcgagatataac
attcccgttagcggtgttccggcgggtaactgggtactgttgggtggtgttgataactca
atagtcaagacggcgaccattgtagctaccaagctccccgatgacgaagatgcctacatt
ttcagacccatccgacactttttcgaatccgtcttcaaggtcgcggtcgagccgatcaat
ccctctgaattacccaagatgcttgacggtctccgcaagatcaacaagtcatacccactc
atctcaaccaaagtagaggagtcaggagagcacgttgttctcggaactggagaactttat
atggactgcgttctgcatgacctccgacggctatatgcagacatggagattaaggtgtca
gatccggtcacgcggttctgcgagaccgtcgtcgagatgtctgccatcaagtgctacgct
cttactccaaacaagaagaacaagatcaccatgattgccgaaccgctagaccctggaatt
gcagaagatatcgaggctggcaaggtcagcatcaaagaccctgtgcgtgtagtcggcaag
ttcttcgaagagaactatgggtacgatttactcgcatcacgcaacatctgggcatttggg
ccagacgacatgggcccgaatattctacaaaacgacacactgcccgcagaagttgacggc
aagactctgagaacagtgcgagatactcttcgacagggtttcagctgggccactcgagag
ggaccgctctgcgaagagcccattcgcaacaccaagttccgcatcacagacgtcgaactc
gcatcagaagcaatcttccgcggaggtggtcagattatccccacaagtcgtcgagcctgc
tattcaagtttcttgatggcaagccctaggctgatggagccggtatactcttgcagtatg
gtcggtccttcagacaccaagagcagtctatacaccgtacttgcgcgaaggagaggccac
gttctgcaagacggtcccatcgcaggcacaccgctttacaacgtgcgtggtcttatcccg
gtcatcgattccttcggtttcgagaccgatcttaggatccacacacaaggccaagtctcc
ctctccctcgtcttcgaccgctggtcaatcgtccctggcgaccctctcgataaagaggtc
acaacccgaccgctcgaacccgcaaccgcacaacagttggcacgtgactttgtcctcaag
actcgcaggaggaagggtctcgcggaggatgttaccataagtaagttcctagagcctgag
ctttttcgcagtttgaaggaaagcggggtattggatggttag
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