Pyrenophora teres: PTT_16968
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Entry
PTT_16968 CDS
T01613
Name
(GenBank) hypothetical protein
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
pte
Pyrenophora teres
Pathway
pte03420
Nucleotide excision repair
pte04111
Cell cycle - yeast
pte04120
Ubiquitin mediated proteolysis
pte04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pte00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
PTT_16968
04120 Ubiquitin mediated proteolysis
PTT_16968
09124 Replication and repair
03420 Nucleotide excision repair
PTT_16968
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
PTT_16968
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pte04121
]
PTT_16968
03400 DNA repair and recombination proteins [BR:
pte03400
]
PTT_16968
Enzymes [BR:
pte01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
PTT_16968
Ubiquitin system [BR:
pte04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
PTT_16968
Multi subunit type E3
SCF complex
Ring finger protein
PTT_16968
Cul2 complex
PTT_16968
Cul3 complex
PTT_16968
Cul4 complex
PTT_16968
Cul7 complex
PTT_16968
Cul8 complex
PTT_16968
Cul9 complex
PTT_16968
DNA repair and recombination proteins [BR:
pte03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
PTT_16968
TCR (transcription coupled repair) factors
Cul4-CSA complex
PTT_16968
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
zf-RING_16
Motif
Other DBs
NCBI-ProteinID:
EFQ87525
UniProt:
E3S3D4
LinkDB
All DBs
Position
Unknown
AA seq
113 aa
AA seq
DB search
MADIDMADAPPAKTKTAKAGASGEGDKKRFEWNAVALWAWDIVVDNCAICRNHIMDLCIE
CQANQASATSEECTVAWGICNHAFHFHCISRWLKTRQVCPLDNRDWEFQKYGR
NT seq
342 nt
NT seq
+upstream
nt +downstream
nt
atggcggatatcgacatggcagatgcgcccccagccaagacgaagacggccaaggccggt
gccagcggagagggcgacaagaagcgcttcgaatggaacgccgtcgcgctgtgggcgtgg
gacattgtcgtagacaactgcgccatttgccgtaatcacatcatggacctctgcattgag
tgccaggccaaccaagcgtcggcgacaagcgaggagtgcaccgtggcatggggaatctgc
aatcacgccttccacttccactgcatctcacgatggctcaagacccgacaagtctgcccg
ctcgacaaccgagactgggaattccagaagtacggccgatag
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integrated database retrieval system