Piliocolobus tephrosceles (Ugandan red Colobus): 111529308
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Entry
111529308 CDS
T07491
Symbol
LSM3
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
pteh
Piliocolobus tephrosceles (Ugandan red Colobus)
Pathway
pteh03018
RNA degradation
pteh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pteh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111529308 (LSM3)
09123 Folding, sorting and degradation
03018 RNA degradation
111529308 (LSM3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pteh03019
]
111529308 (LSM3)
03041 Spliceosome [BR:
pteh03041
]
111529308 (LSM3)
Messenger RNA biogenesis [BR:
pteh03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111529308 (LSM3)
mRNA degradation factors
5'-3' decay
Lsm complex
111529308 (LSM3)
Spliceosome [BR:
pteh03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
111529308 (LSM3)
Complex C
U2 snRNP components
111529308 (LSM3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
TIG_SUH
vATP-synt_E
RimP_C
Motif
Other DBs
NCBI-GeneID:
111529308
NCBI-ProteinID:
XP_023051970
Ensembl:
ENSPTEG00000011435
UniProt:
A0A8C9H2N6
LinkDB
All DBs
Position
2:complement(46869109..46888374)
Genome browser
AA seq
102 aa
AA seq
DB search
MADDVDQQQTTNTVEEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEET
VTTIEIDEETYEEIYKSTKRNIPMLFVRGDGVVLVAPPLRVG
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgacgtagaccagcaacaaactaccaacactgtagaggagcccctggatctt
atcaggctcagcctagatgagcgaatttatgtgaagatgagaaatgaccgagagcttcga
ggcagattacatgcttatgatcaacatttaaatatgatcttgggagacgtggaagaaact
gtgactactatagaaattgatgaagaaacatatgaagagatatataaatcaacaaaacgg
aatattccaatgctctttgtccggggagatggcgttgtcctggttgcccctccactgaga
gttggctga
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integrated database retrieval system
