Piliocolobus tephrosceles (Ugandan red Colobus): 113219552
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Entry
113219552 CDS
T07491
Symbol
KDM2B
Name
(RefSeq) lysine-specific demethylase 2B isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
pteh
Piliocolobus tephrosceles (Ugandan red Colobus)
Pathway
pteh03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pteh00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
113219552 (KDM2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pteh03000
]
113219552 (KDM2B)
04121 Ubiquitin system [BR:
pteh04121
]
113219552 (KDM2B)
03036 Chromosome and associated proteins [BR:
pteh03036
]
113219552 (KDM2B)
Enzymes [BR:
pteh01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
113219552 (KDM2B)
Transcription factors [BR:
pteh03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
113219552 (KDM2B)
Ubiquitin system [BR:
pteh04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
113219552 (KDM2B)
Chromosome and associated proteins [BR:
pteh03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
113219552 (KDM2B)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
113219552 (KDM2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
F-box
AppA_SCHIC
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
113219552
NCBI-ProteinID:
XP_031792238
Ensembl:
ENSPTEG00000032490
LinkDB
All DBs
Position
10:complement(119195443..119270383)
Genome browser
AA seq
1017 aa
AA seq
DB search
MWVYTTGKQQGRDLNLRPARPFQRLEVLTVRIVREAGSMESRGLLASGSSKDLGRESGII
SVCLVTLPTDAPRKPSIDGFSSDSWLEMEEEACDQQPQEEEEKDEEGEGRDRAPKPPTDG
SASPTSMPSEDQEALGKKPKAPALRFLKRTLSDESEESVKSATLPVDYPKTPTGSPATEV
STKWTHLTEFELKGLKALVEKLESLPENKKCVPEGIEDPQALLEGVKNVLKEHADDDPSL
AITGVPVVTWPKKTPKNRAVGRPKGKLGPASAVKLAANRTTAGARRRRTRCRKCEACLRT
ECGECHFCKDMKKFGGPGRMKQSCIMRQCIAPVLPHTAVCLVCGEAGKEDTVEEEEGKFN
LMLMECSICNEIIHPGCLKIKESEGVVNDELPNCWECPKCNHAGKTGKAYKQKRGPGFKY
ASNLPGSLLKEQKMNRDNKEGQEPAKRRSECEEAPRRRSDEHPKKVPPDGLLRRKSDDAH
LRKKRKYEKPQELTGRKRASSLQTSPGSSSHLSPRPPLGSSLSPWWRSSLTYFQQQLKPG
KEDKLFRKKRRSWKNAEDRMALANKPLRRFKQEPEDDLPEAPPKTRESDHSRSSSPTAGP
STEGTEGPEEKKKVKMRRKRRLPNKELSRELSKELNHEIQRTESSLANENQQPIKSEPES
EGEEPKRPPGVCERPHRFSKGLNGTPRELRHQLGPGLRSPPRVISRPPPSVSPPKCIQMG
RHVIRPPPISPPPDSLPLDDGAAHVMHREVWMAVFSYLSHQDLCVCMRVCRTWNRWCCDK
RLWTRIDLNHCKSITPLMLSGIIRRQPVSLDLSWTNISKKQLSWLINRLPGLRDLVLSGC
SWIAVSALCSSSCPLLRTLDVQWVEGLKDAQMRDLLSPPTDNRPGQMDNRSKLRNIVELR
LAGLDITDASLRLIIRHMPLLSKLHLSYCNHVTDQSINLLTAVGTTTRDSLTEINLSDCN
KVTDQCLSFFKRCGNICHIDLRYCKQVTKEGCEQFIAEMSVSVQFGQVEEKLLQKLS
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtgtacacaactgggaagcagcagggtagggatctgaacctgcgtccagcacgg
cctttccagaggctggaggtactgaccgttaggattgtcagagaagctggatctatggag
tcaaggggacttttggcgagtggaagttccaaagaccttggcagggagtcaggcatcatc
tctgtctgtcttgtgaccctccccacagatgccccgaggaagcccagcatagacggcttc
tcttcggattcctggctggagatggaggaggaggcctgtgatcagcagcctcaggaggag
gaggagaaggacgaggagggtgagggcagggacagggcacccaaaccgcccaccgatggc
tccgcttcacccaccagcatgccctccgaggaccaggaggccctcgggaagaagcccaaa
gcacctgccctgcggttcctcaaaaggactttgtctgacgagtcagaggagagtgtgaag
tccgccacgttgcccgtagactaccccaagacccccactggctctcccgccacggaggtc
tctactaagtggacccatctgaccgagtttgaactgaagggcctgaaagctctggtggag
aaactggaatccctcccggagaacaagaagtgtgttcccgagggcatcgaggacccccag
gcactcctggagggcgtgaagaacgtcctgaaggagcacgcggatgatgaccctagtctg
gccatcactggggtccctgtggtgacttggccaaagaagactccaaagaaccgggctgtg
ggtcggcccaaggggaagctgggcccggcctccgcggtgaagttggccgccaaccggaca
acggcaggagctcggcggcgccggacgcgatgccgcaagtgcgaggcctgcctgcggacc
gagtgcggagagtgccacttctgcaaggacatgaagaagttcgggggccccgggcgcatg
aagcagagctgcatcatgcggcagtgcatcgcgccagtgctgccccacaccgccgtgtgc
cttgtgtgtggcgaggcggggaaggaagacacggtggaagaggaggaaggcaagtttaac
ctcatgctcatggagtgctccatctgcaacgaaatcatccaccccggatgccttaagatt
aaggagtcagagggtgtggtcaacgacgagcttccaaactgctgggagtgtccgaagtgt
aaccacgccggcaagaccgggaaagcctacaagcaaaagcgtggccctggctttaagtac
gcctccaacctgcccggctccctgctcaaggagcagaagatgaaccgggacaacaaggaa
gggcaggaacctgccaagcggaggagcgaatgtgaggaggcgccccggcgcaggtcggac
gagcaccccaagaaggtgccgccggacggcctcctgcgcagaaagtctgatgacgcgcac
ctgaggaagaagcggaaatacgagaagccccaggagctgactggacgcaagcgggcctca
tcgcttcaaacgtcccccggttcctcctctcacctctcgccgaggccccctctaggcagc
agcctcagcccctggtggagatccagtctcacttacttccagcagcagctcaaacctggc
aaagaagataagcttttcaggaaaaagcgtcggtcctggaagaacgctgaggaccgcatg
gcgctggccaacaagcccctccggcgcttcaagcaggaacccgaggacgatctgcccgag
gcacccccaaagaccagggagagcgaccactcccgctccagctctcccaccgcaggaccc
agcaccgaggggaccgagggcccggaggagaagaagaaggtgaagatgcgccggaagcgg
cggcttcccaacaaggagctgagcagggagctgagcaaggagctcaaccacgagatccag
aggacggagagcagcctggccaacgagaaccagcagcccatcaagtcggagcctgagagc
gagggcgaggaacccaagcggcccccaggcgtctgcgagcgtccccaccgcttcagcaag
gggctcaacggcacccctcgggagctgcggcaccagctgggacccggcctgcgcagcccg
ccccgtgtcatctcccggcccccaccttccgtgtccccgcccaagtgtatccagatgggg
cgccatgtgatccggccaccccccatcagccccccgcctgactcgctacccctggacgat
ggggcagcccacgtcatgcacagggaggtgtggatggccgtcttcagctacctcagccac
caagacctgtgtgtctgcatgcgggtctgcaggacctggaaccgctggtgctgcgataag
cggttgtggacccgcattgacctgaaccactgcaagtctatcacacccctgatgctgagt
ggcatcatccggcgacagcctgtctccctcgacctcagctggaccaatatctccaagaag
cagctgagctggctcatcaaccggctgcctgggctccgggacttggtgctgtcaggctgc
tcatggatcgcggtctcggccctttgcagctccagttgtccgctgctccgaaccctggat
gtccagtgggtggagggactaaaggatgcccagatgcgggatctcctgtccccgcccacg
gacaacaggccaggtcagatggacaatcggagcaagctccggaacatcgtggagctgcgc
ctggcaggcctggacatcacagatgcctccctgcggctcatcatccgccacatgcccctg
ctctccaagctccacctcagttactgtaaccacgtcaccgaccagtccatcaacctgctc
accgctgttggcaccaccacccgagactccttaaccgagatcaacctgtctgactgcaat
aaggtcactgatcagtgcctgtccttcttcaaacgctgtggaaacatctgtcacattgac
ctgaggtactgcaagcaagtcaccaaggaaggctgtgagcagttcatagccgagatgtct
gtgagtgtccagtttgggcaagtagaagaaaaactcctgcaaaaactgagttag
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