Parasteatoda tepidariorum (common house spider): 107441882
Help
Entry
107441882 CDS
T06106
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
ptep
Parasteatoda tepidariorum (common house spider)
Pathway
ptep03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ptep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
107441882
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptep03400
]
107441882
Enzymes [BR:
ptep01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
107441882
DNA repair and recombination proteins [BR:
ptep03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
107441882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
BRCT_2
DNA_ligase_A_C
RNA_ligase
DNA_ligase_IV
LIG3_BRCT
RTT107_BRCT_5
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
107441882
NCBI-ProteinID:
XP_042896531
LinkDB
All DBs
Position
9:complement(32339558..32370550)
Genome browser
AA seq
911 aa
AA seq
DB search
MPTVAEEVPFLSLCKLCNKISEKKGKDKVQLLKDFIDYWRKFHNKLHQNNPNETDSFYPA
MRLLLPQCERQRAAYGIKEFTFAKLLIEIFCLDKNSVDAQKLINYRSPKTAKAEAGDFAS
VAFFVLKNRSPEVGSLKVSDINQYLDNIASNNASKHKDELKNDLLYLLRNTSALEQKWLI
RMILKEMKLGISENSILKAYHADAKDLFNVTNSLEKVCLSLKNPETHLHEIEVSLFAPFR
PMLSEMALPNQVEQLMKNKPFIIETKYDGERLQLHKDGTSYMYFSRGGFDCTDTYGSSPL
QGKFTPHIHNSFKTSTKSCILDGEIVIYSNKLNCIVSKGENADIQALEPDGDFAPCFCVF
DILMLNDKVLTNYPVTERVSFIKDTFSQIENKIRYTDQIIATTNTEVNDELNKAIDGRLE
GIVVKNPESVYKPNIRKGGGWLKVKPEYIENLMNELDLLIIGGYYGEGRRSNIISHFLLA
VASNEQKDSEPKCYYSFAKVGSGYTFKELLELSAKIEQHWQKYDPKKPPKNLIIGGGRKE
QPDLWIEPSKSLIVQVKASEINGSKSFATNCTLRFPRVEKIRYDKSWRDCMTMRELEDLR
NLAQGRLATRRSTVTEAEEEPSPKKQKMQKERIVSIAPHFRPTDISNVQQVTDIFKNKEM
CVIFSSLEKKQEVEKKIAQSGGKLVQNPGNGTFCIICDKITAKVKNLINKGIYDVVKEEW
IENCYMEGLLLQWKPDDLYHAKQETCEKLGQFYDKYGDNFTEDVSENSLKRIFSSISEEE
WLAQDMTNQKIVELEKNYFPDSLPCGLFRGCWIFIKGKHNEAFRESIEVEMKLLSLKLKM
FGANICSKVENRTTHIVLPRFTSMDNNPMQKRIHVVTDKWVEDCIRSNQLICEEDYNPFR
MDSSDDSTQTY
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgcctactgttgctgaggaagttccttttctgagcttatgtaaattgtgtaataaaata
tcagagaagaaaggaaaggataaagtacaattgttgaaggactttattgattattggagg
aaatttcataacaaattacatcagaacaatcctaatgaaacagattcattttatcctgca
atgcgtcttttacttcctcaatgtgaaagacaaagagctgcctatggaataaaagagttt
acttttgcaaaactattgatagagatattttgtctggacaaaaatagtgtagatgctcag
aaattaatcaactatcgctctcctaaaactgcaaaagctgaagctggggattttgctagt
gttgctttttttgttttaaaaaatcgtagtcctgaagttggttctcttaaagtatctgat
atcaaccaatatttggataatattgctagtaacaatgcttcaaaacataaagatgaatta
aagaatgacttgctttatcttttgcgtaacacatctgccttggaacaaaagtggttgatt
cgaatgattctgaaagaaatgaaattggggataagtgagaattccatacttaaagcctat
catgcagatgcaaaagacttgttcaatgttaccaacagtttggaaaaagtttgtcttagt
ctgaaaaaccctgaaactcatcttcatgaaattgaagtaagcctatttgctccatttcgt
ccaatgttatcagaaatggctcttcctaatcaggttgaacaattgatgaaaaataaacct
tttatcatagaaacaaaatatgatggtgagagacttcaattacacaaagatgggacatct
tatatgtatttctcaagaggtggctttgattgtactgacacttatggaagctctccctta
caaggaaaatttactccacatatacacaatagttttaagactagtactaaaagctgtatt
ttggatggcgaaattgttatctatagcaataaactgaattgtattgtttctaaaggggag
aatgcagatatacaagctttagagccagatggggattttgctccatgtttttgcgttttt
gacattctcatgctgaatgataaagtattgacaaactatcctgtaactgaaagagtatct
ttcattaaggacacattctcccaaatagaaaacaaaattcgttacactgatcaaatcatt
gcaacaactaatactgaagtaaatgatgaactgaacaaagctattgatggtagacttgag
ggaattgttgtaaaaaatcctgaatcggtatacaagccaaatataagaaaaggaggtggt
tggctgaaagtgaaaccagaatacattgaaaaccttatgaatgaactggatcttcttatt
attggaggatactatggtgaaggccgcagatcaaatataatatctcattttttacttgct
gtagcttcgaatgagcaaaaagatagtgaacctaaatgctattattcatttgcaaaagtt
ggttctggatacacctttaaggagctccttgaactgtcagcaaagattgaacaacattgg
cagaaatatgatccaaaaaaacctccaaagaacctcattattggagggggcaggaaagaa
caaccagatttatggattgaaccttccaaatcactaatagtgcaggtaaaagcttcagaa
ataaatggcagcaaaagctttgcaacaaattgtactttgcgctttcccagggtagaaaag
attcgttatgataagtcatggcgtgattgcatgacaatgagggaattggaagatcttaga
aatcttgcacaaggtcggttagcaaccagacgaagcactgtgacagaggcagaagaagaa
ccttctcctaagaagcaaaaaatgcaaaaagagcgtattgttagtattgcaccacatttt
aggcctactgatatcagtaatgtacaacaggttacagatatttttaagaacaaagaaatg
tgcgttattttctcctctcttgaaaagaaacaagaagttgaaaagaaaatagctcaaagt
gggggaaagctggtgcaaaatcctggaaatggtacattttgcatcatttgtgataaaatc
acagctaaagtaaaaaatctgattaataaaggaatatatgatgttgttaaagaagaatgg
attgaaaattgttatatggaaggattacttttgcagtggaagcctgatgatctctatcat
gctaaacaagaaacttgtgaaaaattaggacaattttatgacaagtatggtgataacttt
actgaagatgtttccgaaaattctttgaaaaggattttttcaagtatttcagaagaagaa
tggttagcacaggatatgacaaatcaaaaaattgttgaactagagaaaaattactttcca
gattcattgccttgcggtttattcagaggctgttggatatttattaaaggaaaacacaat
gaagcgttcagagaatctatagaagttgagatgaaattgctaagtttgaagctaaagatg
tttggtgcaaatatttgttcaaaagttgaaaatagaactacacacatagtgctacctcgt
tttaccagtatggacaacaatcctatgcaaaaacgtattcatgtcgtgacagataaatgg
gtagaagattgcataagaagtaatcaacttatatgtgaagaagattataatcctttcaga
atggatagtagtgatgactctacacaaacatattaa
DBGET
integrated database retrieval system
