Parasteatoda tepidariorum (common house spider): 107449131
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Entry
107449131 CDS
T06106
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
ptep
Parasteatoda tepidariorum (common house spider)
Pathway
ptep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107449131
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptep03041
]
107449131
Spliceosome [BR:
ptep03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
107449131
Complex C
U5 SnRNP specific factors
107449131
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
Roc
Ras
Motif
Other DBs
NCBI-GeneID:
107449131
NCBI-ProteinID:
XP_015920056
LinkDB
All DBs
Position
5:51620986..51646797
Genome browser
AA seq
974 aa
AA seq
DB search
MDADLYDEFGNYIGPQLDTDSEEEEESYERQEPDAIDYNEDEAMEEGHDDDEIPQMQIVL
HEDKKYYPSAAEVYGPDVETIVQEEDTQALTEPIIAPVKRKKFSYVEQDLPITKYNLEFL
ADLMDNTDLIRNVAVVGHLHHGKTSFVDCLIEQTHPDLRAREGSNLRYTDTLYTEQERGV
SIKATPVTFVLPDLKGKSYLMNVFDTPGHVNFSDEVTAAMRLSDGVIIFVDAAEGVMLNT
ERLLKHAVQEKLAICICINKIDRLMLELKLPPQDAYYKLRHIVEEINGLLSTYADDNEPI
QVSPLLGNVCFASSQYSLCFTLRSFAHMYAQTYGGISVPDFSKRLWGDIYFNSKTRKFTR
KAPHSTVQRSFVEFILEPLYKLFAQVVGDVDSSLPQLLDELSIKLTKSEMKLNVRPLLRL
INSKFVGDFNGFVDMCVHHVPAPSASAKRKIEHIYTGPSGTELADVMADCDPEGPLMVHT
TKQYSTQDATSFHVFGRVFSGTLQANQDVRILGETYTSTDEEDSRILTVGRLWISEARYK
IEVNRVPAGNWVLIEGIDQPIVKTATIVDVSEAAELFIFRPLKFNTNSVIKIAVEPVNPS
ELPKMLGGLRKVNKSYPLLSTKIEESGEHIILGTGELYLDCVMHDLRKMYSEIDIKVADP
VVSFCETVVETSSLKCFAETPNKKNKLTMIAEPLEKGLAEDIENEVVQINWNRKRLGEFF
QTKYDWDLLAARSIWAFGPDTTGPNILVDDTLPSEVDKGLLSMVKDSIVQGFQWATREGP
LCEEPIRNVKFKILDAVIAGEPIHRGGGQIIPTARRVAYSAFLMATPRLMEPYYFVEVQA
PADCVSAVYTVLARRRGHVTQDAPVPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFCL
SVFHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSINKFFDDPML
LELARQDVMLNYPL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggatgctgacctctatgatgagtttggaaattacatcggaccccaacttgatactgac
tcagaagaggaggaagaaagttatgagagacaagaacctgatgctattgactataatgaa
gatgaagcaatggaagaaggccatgatgatgatgaaatccctcagatgcaaatagtttta
catgaagataaaaaatattatccatctgcggcagaagtttatggtcctgatgtagaaact
atagtacaagaagaagatactcaagctttaactgagcctatcattgcacctgtgaaaaga
aaaaagttttcttatgtggagcaagatttacctatcacaaaatacaatttagaatttctg
gctgatttaatggataatactgatcttattcgcaatgttgcagtagttggtcatcttcac
catggaaagacatcttttgtggattgcctaattgaacaaactcatcctgatctaagagct
cgtgaaggatcaaatttgcgttatactgacactttgtatacggaacaagagagaggtgtt
agtataaaagccactcctgtaacatttgttctaccagatctgaaaggaaaatcttacctt
atgaatgtttttgacacacctggtcatgtaaatttttctgatgaagtgactgctgcaatg
aggcttagtgatggtgttataattttcgtagatgcagcagaaggtgtgatgctgaacact
gagagattacttaagcatgcagttcaagaaaaacttgcaatttgcatatgcatcaataaa
atagataggctcatgctggaattaaaattgcctccccaagatgcttactataaattgagg
catatagttgaagaaattaatggattattaagcacttatgctgatgataatgagcccata
caagtttctccccttcttggaaatgtttgttttgcaagttctcaatatagtttgtgtttt
actctgagatcttttgctcacatgtatgcacaaacctatggtggaattagtgttccagac
ttttcaaaacgtttatggggtgatatatattttaatagcaaaacgcgtaaatttactagg
aaagcacctcacagtacagtacaaaggagctttgtagagttcattttagaacctctgtat
aaattatttgctcaggttgttggagatgttgattcatctttaccacaattgttagatgaa
ctttcaattaaactaactaagtctgaaatgaagctaaatgttcgcccactgttaagactt
atcaattcaaagtttgtcggcgatttcaatggctttgttgatatgtgtgtccatcatgtc
ccagctccatcagcaagtgctaagagaaagatagagcatatttacactggaccttctggc
accgaattagctgatgttatggctgattgtgaccctgagggtcctctaatggtacatact
acaaaacagtactctacgcaagatgccactagtttccatgtgtttggaagggtgtttagt
ggaactctgcaagcaaatcaggatgttcgcatactgggagaaacttatacttcaacagat
gaagaagactcaagaattttgaccgttggccgactttggatatctgaggctagatacaaa
attgaagttaatagagttcctgctggaaattgggttctaattgaaggcattgatcaacct
attgtgaaaactgccactattgtcgatgttagtgaagcagctgaactttttatttttcga
cctctgaaattcaatactaattctgtgataaaaattgctgttgagcctgtcaatccatct
gagctgccaaaaatgttaggtggcttaagaaaagttaataaatcatatcctcttctgagc
acaaagattgaggagtcaggagaacatattattcttggtactggtgaactttatttagat
tgtgttatgcacgatttaaggaagatgtattcagaaatagacattaaagtcgctgatcca
gttgtatcattttgtgaaactgtcgttgaaacatcatcattaaaatgttttgctgaaact
ccaaacaaaaaaaataaattgacaatgattgctgaaccattggaaaaaggcttagctgaa
gatatcgaaaatgaagttgtacaaattaactggaatcgtaaaagattaggagaatttttc
cagactaagtatgattgggatttgctagcagctcgttccatttgggcttttggacccgat
acaacaggacccaatattttagtagatgatacattgccttctgaggtagataaaggttta
ttgagcatggttaaagattcaattgtacaagggtttcagtgggctactagagaaggtcct
ctctgtgaagagcccattcgaaatgtgaagtttaaaattttggatgcagtaattgctgga
gaacctattcatcgtggtggaggccaaataattccaactgccagaagagtagcttattct
gcttttcttatggcaactcctcgactaatggaaccgtattactttgttgaagtacaagct
ccagctgattgtgtatcagctgtgtacacagtgttggcccgtcgcaggggacatgtaact
caagatgcaccagttcctggatctccattatatactattaaagcatttattccggctatt
gactcctttggttttgagactgatttgagaactcatactcaaggtcaagctttctgttta
tcagtgtttcatcactggcagattgttcctggtgatcccctagataaaagtatagttatt
agacctttagaaccacagcctgctccacatttagccagagagttcatgattaaaactagg
aggaggaagggtctcagtgaagatgtcagcatcaacaaattcttcgacgatcctatgttg
ttggaacttgctcgtcaagacgttatgttaaattatcctttgtaa
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