Parasteatoda tepidariorum (common house spider): 107452221
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Entry
107452221 CDS
T06106
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
ptep
Parasteatoda tepidariorum (common house spider)
Pathway
ptep03018
RNA degradation
ptep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107452221
09123 Folding, sorting and degradation
03018 RNA degradation
107452221
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptep03019
]
107452221
03041 Spliceosome [BR:
ptep03041
]
107452221
Messenger RNA biogenesis [BR:
ptep03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107452221
mRNA degradation factors
5'-3' decay
Lsm complex
107452221
Spliceosome [BR:
ptep03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
107452221
Complex C
U2 snRNP components
107452221
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Glutaredoxin
TIG_SUH
RimP_C
Motif
Other DBs
NCBI-GeneID:
107452221
NCBI-ProteinID:
XP_015924050
LinkDB
All DBs
Position
7:complement(75271273..75277786)
Genome browser
AA seq
104 aa
AA seq
DB search
MAMTDDTEQSAANAVEEPLDLIRLSLDERIYVKMRNERELRGRLHAYDQHLNMILGDVEE
TVTTIEIDEETYEEVYRTTKRTVPMLFVRGDGVILVSPPIRGGM
NT seq
315 nt
NT seq
+upstream
nt +downstream
nt
atggctatgactgatgatactgaacaatcagctgcaaatgctgtagaagaacctttggat
ttgattcgcctgagtttagatgaacgcatttatgtgaagatgagaaacgaaagagaatta
agaggtagattacacgcatacgatcaacatttgaacatgattctaggagatgttgaggaa
actgttacaactattgaaattgatgaagaaacatatgaagaagtttatagaacgaccaag
agaacagtaccaatgctatttgttcgaggtgatggagttattctcgtatctcctcccatt
cgtggaggaatgtaa
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